Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 CES1P2-201ENST00000566467 1242 ntBASIC10.14□□□□□ -0.79
APOC4P55056 COX5A-205ENST00000568517 582 ntTSL 3 BASIC10.14□□□□□ -0.79
APOC4P55056 MIR3940-201ENST00000579148 102 ntBASIC10.14□□□□□ -0.79
APOC4P55056 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC10.14□□□□□ -0.79
APOC4P55056 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC10.14□□□□□ -0.79
APOC4P55056 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC10.14□□□□□ -0.79
APOC4P55056 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
APOC4P55056 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
APOC4P55056 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
APOC4P55056 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
APOC4P55056 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC10.14□□□□□ -0.79
APOC4P55056 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
APOC4P55056 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC10.14□□□□□ -0.79
APOC4P55056 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
APOC4P55056 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
APOC4P55056 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC10.14□□□□□ -0.79
APOC4P55056 AL157996.1-201ENST00000624684 2299 ntBASIC10.14□□□□□ -0.79
APOC4P55056 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC10.14□□□□□ -0.79
APOC4P55056 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC10.14□□□□□ -0.79
APOC4P55056 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC10.14□□□□□ -0.79
APOC4P55056 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
APOC4P55056 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC10.14□□□□□ -0.79
APOC4P55056 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
APOC4P55056 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC10.14□□□□□ -0.79
APOC4P55056 NRADDP-202ENST00000641269 1585 ntBASIC10.14□□□□□ -0.79
APOC4P55056 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
APOC4P55056 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
APOC4P55056 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
APOC4P55056 USP28-214ENST00000545540 3431 ntTSL 2 BASIC10.13□□□□□ -0.79
APOC4P55056 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 AC015909.5-201ENST00000624336 2266 ntBASIC10.13□□□□□ -0.79
APOC4P55056 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
APOC4P55056 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 IL9RP3-201ENST00000442856 1674 ntBASIC10.13□□□□□ -0.79
APOC4P55056 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC10.13□□□□□ -0.79
APOC4P55056 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
APOC4P55056 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
APOC4P55056 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
APOC4P55056 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC10.13□□□□□ -0.79
APOC4P55056 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC10.13□□□□□ -0.79
APOC4P55056 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC10.13□□□□□ -0.79
APOC4P55056 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC10.13□□□□□ -0.79
APOC4P55056 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC10.13□□□□□ -0.79
APOC4P55056 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC10.13□□□□□ -0.79
APOC4P55056 STK24P1-201ENST00000455035 1291 ntBASIC10.13□□□□□ -0.79
APOC4P55056 AL157792.1-201ENST00000488281 530 ntBASIC10.13□□□□□ -0.79
APOC4P55056 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC10.13□□□□□ -0.79
APOC4P55056 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC10.13□□□□□ -0.79
APOC4P55056 MBP-227ENST00000526111 581 ntTSL 4 BASIC10.13□□□□□ -0.79
APOC4P55056 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC10.13□□□□□ -0.79
APOC4P55056 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC10.13□□□□□ -0.79
APOC4P55056 AL356740.1-201ENST00000602192 1297 ntBASIC10.13□□□□□ -0.79
APOC4P55056 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC10.13□□□□□ -0.79
APOC4P55056 AL118522.1-201ENST00000611368 560 ntBASIC10.13□□□□□ -0.79
APOC4P55056 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC10.13□□□□□ -0.79
APOC4P55056 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
APOC4P55056 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC10.13□□□□□ -0.79
APOC4P55056 MIR6746-201ENST00000620971 63 ntBASIC10.13□□□□□ -0.79
APOC4P55056 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 AC117503.4-201ENST00000623229 1418 ntBASIC10.13□□□□□ -0.79
APOC4P55056 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
APOC4P55056 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 KRT8P24-201ENST00000560290 1559 ntBASIC10.13□□□□□ -0.79
APOC4P55056 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC10.13□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms