Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 KRT8P29-201ENST00000420409 1371 ntBASIC12.22□□□□□ -0.45
CCR9P51686 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CCR9P51686 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.22□□□□□ -0.45
CCR9P51686 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.22□□□□□ -0.45
CCR9P51686 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.22□□□□□ -0.45
CCR9P51686 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CCR9P51686 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.22□□□□□ -0.45
CCR9P51686 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 COX5BP8-201ENST00000416911 349 ntBASIC12.22□□□□□ -0.45
CCR9P51686 AC078875.1-201ENST00000431907 724 ntBASIC12.22□□□□□ -0.45
CCR9P51686 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.22□□□□□ -0.45
CCR9P51686 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.22□□□□□ -0.45
CCR9P51686 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CCR9P51686 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.22□□□□□ -0.45
CCR9P51686 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 AP005018.1-201ENST00000525475 301 ntBASIC12.22□□□□□ -0.45
CCR9P51686 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.22□□□□□ -0.45
CCR9P51686 AC106886.1-201ENST00000568660 600 ntBASIC12.22□□□□□ -0.45
CCR9P51686 RN7SL455P-201ENST00000580629 282 ntBASIC12.22□□□□□ -0.45
CCR9P51686 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.22□□□□□ -0.45
CCR9P51686 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CCR9P51686 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CCR9P51686 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CCR9P51686 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CCR9P51686 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CCR9P51686 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.22□□□□□ -0.45
CCR9P51686 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.22□□□□□ -0.45
CCR9P51686 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.22□□□□□ -0.45
CCR9P51686 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.22□□□□□ -0.45
CCR9P51686 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.22□□□□□ -0.45
CCR9P51686 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.22□□□□□ -0.45
CCR9P51686 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CCR9P51686 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CCR9P51686 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCR9P51686 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCR9P51686 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCR9P51686 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCR9P51686 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCR9P51686 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCR9P51686 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCR9P51686 AC007614.4-201ENST00000564048 1827 ntBASIC12.21□□□□□ -0.45
CCR9P51686 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCR9P51686 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCR9P51686 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.21□□□□□ -0.45
CCR9P51686 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCR9P51686 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.21□□□□□ -0.45
CCR9P51686 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CCR9P51686 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCR9P51686 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCR9P51686 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CCR9P51686 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CCR9P51686 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.21□□□□□ -0.45
CCR9P51686 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.21□□□□□ -0.45
CCR9P51686 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCR9P51686 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CCR9P51686 CROCCP4-201ENST00000457096 498 ntBASIC12.21□□□□□ -0.45
CCR9P51686 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCR9P51686 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.21□□□□□ -0.45
CCR9P51686 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCR9P51686 DUX4L45-201ENST00000566406 1057 ntBASIC12.21□□□□□ -0.45
CCR9P51686 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.21□□□□□ -0.45
CCR9P51686 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.21□□□□□ -0.45
CCR9P51686 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CCR9P51686 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
CCR9P51686 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.21□□□□□ -0.45
CCR9P51686 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCR9P51686 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCR9P51686 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCR9P51686 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCR9P51686 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.21□□□□□ -0.46
CCR9P51686 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.21□□□□□ -0.46
CCR9P51686 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CCR9P51686 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
CCR9P51686 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.46
CCR9P51686 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms