Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CTLA4P16410 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
CTLA4P16410 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
CTLA4P16410 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CTLA4P16410 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CTLA4P16410 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.28□□□□□ -0.44
CTLA4P16410 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CTLA4P16410 AC098934.1-203ENST00000442868 1262 ntBASIC12.28□□□□□ -0.44
CTLA4P16410 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.28□□□□□ -0.44
CTLA4P16410 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.28□□□□□ -0.44
CTLA4P16410 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CTLA4P16410 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CTLA4P16410 SCARNA20.5-201ENST00000516991 142 ntBASIC12.28□□□□□ -0.44
CTLA4P16410 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.28□□□□□ -0.44
CTLA4P16410 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CTLA4P16410 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.28□□□□□ -0.44
CTLA4P16410 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CTLA4P16410 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.28□□□□□ -0.44
CTLA4P16410 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CTLA4P16410 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CTLA4P16410 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.28□□□□□ -0.44
CTLA4P16410 AL031673.1-201ENST00000611460 466 ntBASIC12.28□□□□□ -0.44
CTLA4P16410 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.28□□□□□ -0.44
CTLA4P16410 AC244452.3-201ENST00000636814 210 ntBASIC12.28□□□□□ -0.44
CTLA4P16410 GHET1-201ENST00000627071 1906 ntBASIC12.28□□□□□ -0.44
CTLA4P16410 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CTLA4P16410 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.28□□□□□ -0.44
CTLA4P16410 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CTLA4P16410 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CTLA4P16410 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.28□□□□□ -0.44
CTLA4P16410 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.28□□□□□ -0.44
CTLA4P16410 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CTLA4P16410 AC102953.2-201ENST00000609755 3026 ntBASIC12.28□□□□□ -0.44
CTLA4P16410 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CTLA4P16410 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.28□□□□□ -0.44
CTLA4P16410 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CTLA4P16410 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CTLA4P16410 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CTLA4P16410 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CTLA4P16410 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC12.28□□□□□ -0.44
CTLA4P16410 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
CTLA4P16410 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CTLA4P16410 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.28□□□□□ -0.44
CTLA4P16410 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CTLA4P16410 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CTLA4P16410 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.28□□□□□ -0.44
CTLA4P16410 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.27□□□□□ -0.44
CTLA4P16410 AC138028.6-201ENST00000616106 1482 ntBASIC12.27□□□□□ -0.44
CTLA4P16410 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
CTLA4P16410 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CTLA4P16410 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
CTLA4P16410 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CTLA4P16410 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CTLA4P16410 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
CTLA4P16410 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CTLA4P16410 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.44
CTLA4P16410 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CTLA4P16410 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
CTLA4P16410 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CTLA4P16410 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CTLA4P16410 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CTLA4P16410 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CTLA4P16410 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.27□□□□□ -0.44
CTLA4P16410 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CTLA4P16410 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CTLA4P16410 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CTLA4P16410 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.27□□□□□ -0.45
CTLA4P16410 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.27□□□□□ -0.45
CTLA4P16410 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CTLA4P16410 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CTLA4P16410 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CTLA4P16410 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CTLA4P16410 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.27□□□□□ -0.45
CTLA4P16410 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.27□□□□□ -0.45
CTLA4P16410 FNTAP2-201ENST00000430308 634 ntBASIC12.27□□□□□ -0.45
CTLA4P16410 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.27□□□□□ -0.45
CTLA4P16410 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.27□□□□□ -0.45
CTLA4P16410 HIST2H2BC-201ENST00000498492 580 ntBASIC12.27□□□□□ -0.45
CTLA4P16410 AC092658.1-201ENST00000505836 891 ntBASIC12.27□□□□□ -0.45
CTLA4P16410 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.27□□□□□ -0.45
CTLA4P16410 COQ10BP2-201ENST00000513804 724 ntBASIC12.27□□□□□ -0.45
CTLA4P16410 AC114947.1-202ENST00000514136 344 ntBASIC12.27□□□□□ -0.45
CTLA4P16410 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.27□□□□□ -0.45
CTLA4P16410 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.27□□□□□ -0.45
CTLA4P16410 NDUFV2P1-201ENST00000596415 907 ntBASIC12.27□□□□□ -0.45
CTLA4P16410 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.27□□□□□ -0.45
CTLA4P16410 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.27□□□□□ -0.45
CTLA4P16410 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CTLA4P16410 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CTLA4P16410 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CTLA4P16410 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CTLA4P16410 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.27□□□□□ -0.45
CTLA4P16410 KRT18P9-201ENST00000604826 1300 ntBASIC12.27□□□□□ -0.45
CTLA4P16410 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.27□□□□□ -0.45
CTLA4P16410 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CTLA4P16410 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CTLA4P16410 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CTLA4P16410 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CTLA4P16410 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CTLA4P16410 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms