Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC12.38□□□□□ -0.43
ZIC3O60481 SAA2-206ENST00000530400 323 ntTSL 3 BASIC12.38□□□□□ -0.43
ZIC3O60481 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC12.38□□□□□ -0.43
ZIC3O60481 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC12.38□□□□□ -0.43
ZIC3O60481 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.38□□□□□ -0.43
ZIC3O60481 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
ZIC3O60481 AL136982.5-201ENST00000605222 294 ntBASIC12.38□□□□□ -0.43
ZIC3O60481 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC12.38□□□□□ -0.43
ZIC3O60481 AC026120.2-201ENST00000617239 309 ntBASIC12.38□□□□□ -0.43
ZIC3O60481 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC12.38□□□□□ -0.43
ZIC3O60481 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.38□□□□□ -0.43
ZIC3O60481 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.38□□□□□ -0.43
ZIC3O60481 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.38□□□□□ -0.43
ZIC3O60481 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 AC004623.1-201ENST00000624592 2127 ntBASIC12.38□□□□□ -0.43
ZIC3O60481 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC12.38□□□□□ -0.43
ZIC3O60481 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
ZIC3O60481 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZIC3O60481 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ZIC3O60481 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ZIC3O60481 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ZIC3O60481 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
ZIC3O60481 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ZIC3O60481 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ZIC3O60481 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.37□□□□□ -0.43
ZIC3O60481 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
ZIC3O60481 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.37□□□□□ -0.43
ZIC3O60481 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC12.37□□□□□ -0.43
ZIC3O60481 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC12.37□□□□□ -0.43
ZIC3O60481 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC12.37□□□□□ -0.43
ZIC3O60481 PARP8-218ENST00000513738 596 ntTSL 4 BASIC12.37□□□□□ -0.43
ZIC3O60481 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.37□□□□□ -0.43
ZIC3O60481 FOXN3-AS2-201ENST00000554071 1262 ntBASIC12.37□□□□□ -0.43
ZIC3O60481 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC12.37□□□□□ -0.43
ZIC3O60481 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC12.37□□□□□ -0.43
ZIC3O60481 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 AC024075.2-201ENST00000598112 1473 ntBASIC12.37□□□□□ -0.43
ZIC3O60481 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ZIC3O60481 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.37□□□□□ -0.43
ZIC3O60481 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC12.37□□□□□ -0.43
ZIC3O60481 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.37□□□□□ -0.43
ZIC3O60481 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.37□□□□□ -0.43
ZIC3O60481 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.37□□□□□ -0.43
ZIC3O60481 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.37□□□□□ -0.43
ZIC3O60481 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.37□□□□□ -0.43
ZIC3O60481 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ZIC3O60481 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
ZIC3O60481 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.37□□□□□ -0.43
ZIC3O60481 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.37□□□□□ -0.43
ZIC3O60481 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.37□□□□□ -0.43
ZIC3O60481 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC12.37□□□□□ -0.43
ZIC3O60481 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZIC3O60481 CTBP2P8-201ENST00000422584 1330 ntBASIC12.37□□□□□ -0.43
ZIC3O60481 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC12.37□□□□□ -0.43
ZIC3O60481 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZIC3O60481 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ZIC3O60481 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms