Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CREB3O43889 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.52□□□□□ -0.08
CREB3O43889 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CREB3O43889 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.52□□□□□ -0.09
CREB3O43889 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.52□□□□□ -0.09
CREB3O43889 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.52□□□□□ -0.09
CREB3O43889 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.52□□□□□ -0.09
CREB3O43889 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.52□□□□□ -0.09
CREB3O43889 RPL8P2-201ENST00000430538 502 ntBASIC14.52□□□□□ -0.09
CREB3O43889 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.52□□□□□ -0.09
CREB3O43889 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.52□□□□□ -0.09
CREB3O43889 IGHJ2P-201ENST00000454480 60 ntBASIC14.52□□□□□ -0.09
CREB3O43889 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 AC245884.6-201ENST00000515672 1067 ntBASIC14.52□□□□□ -0.09
CREB3O43889 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.52□□□□□ -0.09
CREB3O43889 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 AC242376.1-201ENST00000559033 726 ntBASIC14.52□□□□□ -0.09
CREB3O43889 AF254983.2-201ENST00000612331 135 ntBASIC14.52□□□□□ -0.09
CREB3O43889 AL353770.1-201ENST00000614915 403 ntBASIC14.52□□□□□ -0.09
CREB3O43889 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.52□□□□□ -0.09
CREB3O43889 AC007718.1-201ENST00000621078 280 ntBASIC14.52□□□□□ -0.09
CREB3O43889 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.52□□□□□ -0.09
CREB3O43889 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.52□□□□□ -0.09
CREB3O43889 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.52□□□□□ -0.09
CREB3O43889 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
CREB3O43889 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.52□□□□□ -0.09
CREB3O43889 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
CREB3O43889 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 MARK2P9-201ENST00000430958 1727 ntBASIC14.52□□□□□ -0.09
CREB3O43889 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CREB3O43889 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CREB3O43889 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CREB3O43889 SALL4P6-201ENST00000429385 1691 ntBASIC14.52□□□□□ -0.09
CREB3O43889 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.52□□□□□ -0.09
CREB3O43889 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.52□□□□□ -0.09
CREB3O43889 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CREB3O43889 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.51□□□□□ -0.09
CREB3O43889 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CREB3O43889 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.51□□□□□ -0.09
CREB3O43889 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC14.51□□□□□ -0.09
CREB3O43889 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.51□□□□□ -0.09
CREB3O43889 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CREB3O43889 TBC1D3J-201ENST00000620719 1426 ntBASIC14.51□□□□□ -0.09
CREB3O43889 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.51□□□□□ -0.09
CREB3O43889 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CREB3O43889 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.51□□□□□ -0.09
CREB3O43889 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.51□□□□□ -0.09
CREB3O43889 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.51□□□□□ -0.09
CREB3O43889 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.51□□□□□ -0.09
CREB3O43889 DUTP3-201ENST00000450025 415 ntBASIC14.51□□□□□ -0.09
CREB3O43889 AP000358.1-201ENST00000456260 156 ntBASIC14.51□□□□□ -0.09
CREB3O43889 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.51□□□□□ -0.09
CREB3O43889 RN7SL67P-201ENST00000492147 296 ntBASIC14.51□□□□□ -0.09
CREB3O43889 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.51□□□□□ -0.09
CREB3O43889 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.51□□□□□ -0.09
CREB3O43889 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.51□□□□□ -0.09
CREB3O43889 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CREB3O43889 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CREB3O43889 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.51□□□□□ -0.09
CREB3O43889 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.51□□□□□ -0.09
CREB3O43889 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.51□□□□□ -0.09
CREB3O43889 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CREB3O43889 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CREB3O43889 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.51□□□□□ -0.09
CREB3O43889 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CREB3O43889 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CREB3O43889 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms