Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 SSR4P1-201ENST00000415143 412 ntBASIC12.19□□□□□ -0.46
NPIPB4C9JG80 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 AC025186.1-201ENST00000478174 870 ntBASIC12.19□□□□□ -0.46
NPIPB4C9JG80 ORAOV1P1-201ENST00000503108 395 ntBASIC12.19□□□□□ -0.46
NPIPB4C9JG80 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 AC093300.1-201ENST00000510368 1201 ntBASIC12.19□□□□□ -0.46
NPIPB4C9JG80 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 AC012044.1-201ENST00000603431 297 ntBASIC12.19□□□□□ -0.46
NPIPB4C9JG80 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 AC060814.4-201ENST00000594169 2163 ntBASIC12.19□□□□□ -0.46
NPIPB4C9JG80 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 AC117503.4-201ENST00000623229 1418 ntBASIC12.19□□□□□ -0.46
NPIPB4C9JG80 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NPIPB4C9JG80 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 ACTBP14-201ENST00000411655 1089 ntBASIC12.18□□□□□ -0.46
NPIPB4C9JG80 AC007274.1-201ENST00000439805 662 ntBASIC12.18□□□□□ -0.46
NPIPB4C9JG80 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 AC079250.1-201ENST00000456046 531 ntBASIC12.18□□□□□ -0.46
NPIPB4C9JG80 RPL18AP3-201ENST00000462885 528 ntBASIC12.18□□□□□ -0.46
NPIPB4C9JG80 RN7SL564P-201ENST00000496309 250 ntBASIC12.18□□□□□ -0.46
NPIPB4C9JG80 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 AL009176.1-201ENST00000607876 650 ntBASIC12.18□□□□□ -0.46
NPIPB4C9JG80 AC011491.1-203ENST00000637688 543 ntBASIC12.18□□□□□ -0.46
NPIPB4C9JG80 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 RBM22P2-201ENST00000393978 1814 ntBASIC12.18□□□□□ -0.46
NPIPB4C9JG80 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 AC007336.3-201ENST00000623886 2160 ntBASIC12.18□□□□□ -0.46
NPIPB4C9JG80 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPB4C9JG80 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms