Protein–RNA interactions for Protein: Q8NHX4

SPATA3, Spermatogenesis-associated protein 3, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA3Q8NHX4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC10.7□□□□□ -0.7
SPATA3Q8NHX4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SPATA3Q8NHX4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 AC012617.1-204ENST00000586340 2305 ntBASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 AC023157.3-201ENST00000619086 2088 ntBASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 AIMP2-203ENST00000400479 1107 ntTSL 5 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 MIR1307-201ENST00000408840 149 ntBASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 SDCBP2P1-201ENST00000416115 614 ntBASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 HNRNPA1P30-202ENST00000440699 997 ntBASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 FTH1-205ENST00000529631 507 ntTSL 4 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 AP001775.1-201ENST00000532608 586 ntBASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 AP000439.1-201ENST00000544004 581 ntTSL 4 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 AC090825.2-201ENST00000557959 739 ntBASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 AC106782.3-201ENST00000563429 258 ntBASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 AC064862.6-203ENST00000605139 691 ntTSL 5 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 AC013472.3-201ENST00000607407 659 ntBASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 AC015909.5-201ENST00000624336 2266 ntBASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SPATA3Q8NHX4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 ASLP1-201ENST00000428790 637 ntBASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 PLA2G6-213ENST00000447598 567 ntTSL 5 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 TRAIP-202ENST00000469027 1145 ntTSL 5 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 AC123595.2-201ENST00000607854 549 ntTSL 4 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC10.68□□□□□ -0.7
SPATA3Q8NHX4 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms