Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 RN7SL725P-201ENST00000606439 259 ntBASIC14.84□□□□□ -0.03
BEST2Q8NFU1 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BEST2Q8NFU1 CR383656.2-201ENST00000548656 2254 ntBASIC14.83□□□□□ -0.03
BEST2Q8NFU1 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BEST2Q8NFU1 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BEST2Q8NFU1 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC14.83□□□□□ -0.03
BEST2Q8NFU1 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.83□□□□□ -0.03
BEST2Q8NFU1 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.83□□□□□ -0.03
BEST2Q8NFU1 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.83□□□□□ -0.03
BEST2Q8NFU1 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
BEST2Q8NFU1 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BEST2Q8NFU1 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
BEST2Q8NFU1 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 AC114501.1-201ENST00000445949 172 ntBASIC14.83□□□□□ -0.04
BEST2Q8NFU1 GULOP-201ENST00000454030 748 ntBASIC14.83□□□□□ -0.04
BEST2Q8NFU1 AC079250.1-201ENST00000456046 531 ntBASIC14.83□□□□□ -0.04
BEST2Q8NFU1 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 AC008026.2-201ENST00000495438 348 ntBASIC14.83□□□□□ -0.04
BEST2Q8NFU1 AC093826.1-201ENST00000508655 993 ntBASIC14.83□□□□□ -0.04
BEST2Q8NFU1 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 MT3-202ENST00000561640 514 ntTSL 3 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 C8orf49-201ENST00000525043 1968 ntBASIC14.83□□□□□ -0.04
BEST2Q8NFU1 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 AL358781.1-202ENST00000321081 1360 ntBASIC14.83□□□□□ -0.04
BEST2Q8NFU1 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST2Q8NFU1 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 BEND3P1-201ENST00000421591 1944 ntBASIC14.82□□□□□ -0.04
BEST2Q8NFU1 AC126335.2-201ENST00000623362 4637 ntBASIC14.82□□□□□ -0.04
BEST2Q8NFU1 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 ABCD1P2-201ENST00000429313 1601 ntBASIC14.82□□□□□ -0.04
BEST2Q8NFU1 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BEST2Q8NFU1 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms