Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 AL022313.4-201ENST00000562756 2046 ntBASIC16.19■□□□□ 0.18
IRX3P78415 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC16.19■□□□□ 0.18
IRX3P78415 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
IRX3P78415 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
IRX3P78415 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
IRX3P78415 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.19■□□□□ 0.18
IRX3P78415 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC16.19■□□□□ 0.18
IRX3P78415 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC16.19■□□□□ 0.18
IRX3P78415 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.19■□□□□ 0.18
IRX3P78415 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.19■□□□□ 0.18
IRX3P78415 AC083801.1-201ENST00000491689 358 ntBASIC16.19■□□□□ 0.18
IRX3P78415 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC16.19■□□□□ 0.18
IRX3P78415 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC16.19■□□□□ 0.18
IRX3P78415 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC16.19■□□□□ 0.18
IRX3P78415 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.19■□□□□ 0.18
IRX3P78415 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC16.19■□□□□ 0.18
IRX3P78415 RN7SL556P-201ENST00000582856 298 ntBASIC16.19■□□□□ 0.18
IRX3P78415 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.19■□□□□ 0.18
IRX3P78415 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 TET3-201ENST00000305799 5174 ntTSL 5 BASIC16.19■□□□□ 0.18
IRX3P78415 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.19■□□□□ 0.18
IRX3P78415 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC16.19■□□□□ 0.18
IRX3P78415 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.19■□□□□ 0.18
IRX3P78415 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.19■□□□□ 0.18
IRX3P78415 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX3P78415 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX3P78415 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.18■□□□□ 0.18
IRX3P78415 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.18■□□□□ 0.18
IRX3P78415 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX3P78415 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.18■□□□□ 0.18
IRX3P78415 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX3P78415 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
IRX3P78415 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IRX3P78415 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX3P78415 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
IRX3P78415 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
IRX3P78415 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX3P78415 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.18■□□□□ 0.18
IRX3P78415 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX3P78415 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IRX3P78415 PTGER4P2-201ENST00000328411 252 ntBASIC16.18■□□□□ 0.18
IRX3P78415 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX3P78415 USP17L6P-201ENST00000382470 1197 ntBASIC16.18■□□□□ 0.18
IRX3P78415 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC16.18■□□□□ 0.18
IRX3P78415 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX3P78415 PTGER4P3-201ENST00000458150 252 ntBASIC16.18■□□□□ 0.18
IRX3P78415 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX3P78415 RN7SL288P-201ENST00000490496 291 ntBASIC16.18■□□□□ 0.18
IRX3P78415 CASP3-205ENST00000517513 964 ntTSL 5 BASIC16.18■□□□□ 0.18
IRX3P78415 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
IRX3P78415 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC16.18■□□□□ 0.18
IRX3P78415 SRP14-204ENST00000558720 780 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX3P78415 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC16.18■□□□□ 0.18
IRX3P78415 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.18■□□□□ 0.18
IRX3P78415 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX3P78415 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
IRX3P78415 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC16.18■□□□□ 0.18
IRX3P78415 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC16.18■□□□□ 0.18
IRX3P78415 AP000769.1-203ENST00000637245 208 ntBASIC16.18■□□□□ 0.18
IRX3P78415 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX3P78415 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC16.18■□□□□ 0.18
IRX3P78415 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC16.18■□□□□ 0.18
IRX3P78415 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IRX3P78415 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
IRX3P78415 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX3P78415 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX3P78415 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX3P78415 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX3P78415 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
IRX3P78415 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX3P78415 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.18■□□□□ 0.18
IRX3P78415 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC16.17■□□□□ 0.18
IRX3P78415 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC16.17■□□□□ 0.18
IRX3P78415 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.17■□□□□ 0.18
IRX3P78415 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX3P78415 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms