Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MRE11P49959 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRE11P49959 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRE11P49959 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.26■□□□□ 0.19
MRE11P49959 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MRE11P49959 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.26■□□□□ 0.19
MRE11P49959 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC16.26■□□□□ 0.19
MRE11P49959 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
MRE11P49959 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.26■□□□□ 0.19
MRE11P49959 BX284668.4-201ENST00000453917 508 ntBASIC16.26■□□□□ 0.19
MRE11P49959 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.26■□□□□ 0.19
MRE11P49959 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MRE11P49959 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.26■□□□□ 0.19
MRE11P49959 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MRE11P49959 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.26■□□□□ 0.19
MRE11P49959 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.26■□□□□ 0.19
MRE11P49959 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.26■□□□□ 0.19
MRE11P49959 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.26■□□□□ 0.19
MRE11P49959 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.26■□□□□ 0.19
MRE11P49959 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
MRE11P49959 AL353726.2-201ENST00000623259 884 ntBASIC16.26■□□□□ 0.19
MRE11P49959 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.26■□□□□ 0.19
MRE11P49959 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRE11P49959 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRE11P49959 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
MRE11P49959 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
MRE11P49959 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRE11P49959 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRE11P49959 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC16.26■□□□□ 0.19
MRE11P49959 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRE11P49959 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRE11P49959 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRE11P49959 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRE11P49959 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRE11P49959 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.26■□□□□ 0.19
MRE11P49959 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MRE11P49959 AL358781.1-202ENST00000321081 1360 ntBASIC16.26■□□□□ 0.19
MRE11P49959 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MRE11P49959 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC16.25■□□□□ 0.19
MRE11P49959 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
MRE11P49959 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.25■□□□□ 0.19
MRE11P49959 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC16.25■□□□□ 0.19
MRE11P49959 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
MRE11P49959 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
MRE11P49959 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.25■□□□□ 0.19
MRE11P49959 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.25■□□□□ 0.19
MRE11P49959 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.25■□□□□ 0.19
MRE11P49959 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.25■□□□□ 0.19
MRE11P49959 AL162726.2-201ENST00000438986 1017 ntBASIC16.25■□□□□ 0.19
MRE11P49959 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.25■□□□□ 0.19
MRE11P49959 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.25■□□□□ 0.19
MRE11P49959 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 AC091804.1-201ENST00000486888 567 ntBASIC16.25■□□□□ 0.19
MRE11P49959 HIST2H2BC-201ENST00000498492 580 ntBASIC16.25■□□□□ 0.19
MRE11P49959 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC16.25■□□□□ 0.19
MRE11P49959 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.25■□□□□ 0.19
MRE11P49959 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.25■□□□□ 0.19
MRE11P49959 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.25■□□□□ 0.19
MRE11P49959 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MRE11P49959 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.25■□□□□ 0.19
MRE11P49959 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.25■□□□□ 0.19
MRE11P49959 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MRE11P49959 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MRE11P49959 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC16.25■□□□□ 0.19
MRE11P49959 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
MRE11P49959 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.25■□□□□ 0.19
MRE11P49959 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.25■□□□□ 0.19
MRE11P49959 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.25■□□□□ 0.19
MRE11P49959 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
MRE11P49959 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MRE11P49959 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
MRE11P49959 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
MRE11P49959 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MRE11P49959 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MRE11P49959 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
MRE11P49959 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC16.24■□□□□ 0.19
MRE11P49959 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
MRE11P49959 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms