Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNNI2P48788 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.34■□□□□ 0.21
TNNI2P48788 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TNNI2P48788 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TNNI2P48788 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNNI2P48788 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TNNI2P48788 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
TNNI2P48788 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TNNI2P48788 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TNNI2P48788 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TNNI2P48788 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TNNI2P48788 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TNNI2P48788 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TNNI2P48788 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
TNNI2P48788 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.33■□□□□ 0.21
TNNI2P48788 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNNI2P48788 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNNI2P48788 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNNI2P48788 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNNI2P48788 HDGF-202ENST00000368206 960 ntTSL 5 BASIC16.33■□□□□ 0.2
TNNI2P48788 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC16.33■□□□□ 0.2
TNNI2P48788 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC16.33■□□□□ 0.2
TNNI2P48788 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNNI2P48788 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC16.33■□□□□ 0.2
TNNI2P48788 MIR2278-201ENST00000516344 96 ntBASIC16.33■□□□□ 0.2
TNNI2P48788 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC16.33■□□□□ 0.2
TNNI2P48788 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC16.33■□□□□ 0.2
TNNI2P48788 AL590235.1-201ENST00000564650 861 ntBASIC16.33■□□□□ 0.2
TNNI2P48788 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC16.33■□□□□ 0.2
TNNI2P48788 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.33■□□□□ 0.2
TNNI2P48788 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNNI2P48788 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNNI2P48788 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNNI2P48788 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNNI2P48788 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNNI2P48788 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC16.33■□□□□ 0.2
TNNI2P48788 AC093462.1-201ENST00000621167 1683 ntBASIC16.33■□□□□ 0.2
TNNI2P48788 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNNI2P48788 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.33■□□□□ 0.2
TNNI2P48788 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNNI2P48788 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.33■□□□□ 0.2
TNNI2P48788 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
TNNI2P48788 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNNI2P48788 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNNI2P48788 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNNI2P48788 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNNI2P48788 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TNNI2P48788 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
TNNI2P48788 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.32■□□□□ 0.2
TNNI2P48788 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNNI2P48788 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNNI2P48788 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNNI2P48788 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.32■□□□□ 0.2
TNNI2P48788 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNNI2P48788 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNNI2P48788 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.32■□□□□ 0.2
TNNI2P48788 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.32■□□□□ 0.2
TNNI2P48788 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNNI2P48788 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNNI2P48788 GH1-203ENST00000351388 685 ntTSL 2 BASIC16.32■□□□□ 0.2
TNNI2P48788 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNNI2P48788 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC16.32■□□□□ 0.2
TNNI2P48788 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.32■□□□□ 0.2
TNNI2P48788 LILRP2-202ENST00000413572 1383 ntBASIC16.32■□□□□ 0.2
TNNI2P48788 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC16.32■□□□□ 0.2
TNNI2P48788 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNNI2P48788 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC16.32■□□□□ 0.2
TNNI2P48788 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TNNI2P48788 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC16.32■□□□□ 0.2
TNNI2P48788 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC16.32■□□□□ 0.2
TNNI2P48788 AC133141.1-201ENST00000443015 339 ntBASIC16.32■□□□□ 0.2
TNNI2P48788 KRT19P4-201ENST00000443208 943 ntBASIC16.32■□□□□ 0.2
TNNI2P48788 AC027612.2-202ENST00000445955 1199 ntBASIC16.32■□□□□ 0.2
TNNI2P48788 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC16.32■□□□□ 0.2
TNNI2P48788 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC16.32■□□□□ 0.2
TNNI2P48788 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC16.32■□□□□ 0.2
TNNI2P48788 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNNI2P48788 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC16.32■□□□□ 0.2
TNNI2P48788 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC16.32■□□□□ 0.2
TNNI2P48788 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.32■□□□□ 0.2
TNNI2P48788 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.32■□□□□ 0.2
TNNI2P48788 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC16.32■□□□□ 0.2
TNNI2P48788 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC16.32■□□□□ 0.2
TNNI2P48788 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNNI2P48788 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TNNI2P48788 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TNNI2P48788 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNNI2P48788 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNNI2P48788 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TNNI2P48788 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNNI2P48788 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNNI2P48788 MST1P2-201ENST00000457982 2291 ntBASIC16.31■□□□□ 0.2
TNNI2P48788 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.31■□□□□ 0.2
TNNI2P48788 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.31■□□□□ 0.2
TNNI2P48788 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC16.31■□□□□ 0.2
TNNI2P48788 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.31■□□□□ 0.2
TNNI2P48788 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNNI2P48788 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TNNI2P48788 AF013593.1-201ENST00000458074 1487 ntBASIC16.31■□□□□ 0.2
TNNI2P48788 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms