Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GRIA1P42261 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GRIA1P42261 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GRIA1P42261 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GRIA1P42261 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GRIA1P42261 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GRIA1P42261 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GRIA1P42261 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GRIA1P42261 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GRIA1P42261 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
GRIA1P42261 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
GRIA1P42261 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GRIA1P42261 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.02□□□□□ -0.16
GRIA1P42261 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GRIA1P42261 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GRIA1P42261 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.02□□□□□ -0.16
GRIA1P42261 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GRIA1P42261 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GRIA1P42261 CICP9-201ENST00000444451 1913 ntBASIC14.02□□□□□ -0.16
GRIA1P42261 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GRIA1P42261 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GRIA1P42261 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.02□□□□□ -0.16
GRIA1P42261 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
GRIA1P42261 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GRIA1P42261 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.02□□□□□ -0.16
GRIA1P42261 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.02□□□□□ -0.17
GRIA1P42261 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GRIA1P42261 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
GRIA1P42261 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GRIA1P42261 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GRIA1P42261 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GRIA1P42261 PPP1R2P4-201ENST00000424051 595 ntBASIC14.02□□□□□ -0.17
GRIA1P42261 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.02□□□□□ -0.17
GRIA1P42261 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.02□□□□□ -0.17
GRIA1P42261 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.02□□□□□ -0.17
GRIA1P42261 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GRIA1P42261 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.02□□□□□ -0.17
GRIA1P42261 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GRIA1P42261 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.02□□□□□ -0.17
GRIA1P42261 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.02□□□□□ -0.17
GRIA1P42261 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GRIA1P42261 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.02□□□□□ -0.17
GRIA1P42261 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.02□□□□□ -0.17
GRIA1P42261 LINC01783-202ENST00000614408 828 ntBASIC14.02□□□□□ -0.17
GRIA1P42261 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.02□□□□□ -0.17
GRIA1P42261 MIR6752-201ENST00000618442 71 ntBASIC14.02□□□□□ -0.17
GRIA1P42261 AC091544.8-201ENST00000619490 361 ntBASIC14.02□□□□□ -0.17
GRIA1P42261 BX284668.2-205ENST00000619677 828 ntBASIC14.02□□□□□ -0.17
GRIA1P42261 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.02□□□□□ -0.17
GRIA1P42261 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
GRIA1P42261 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
GRIA1P42261 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.02□□□□□ -0.17
GRIA1P42261 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
GRIA1P42261 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.02□□□□□ -0.17
GRIA1P42261 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GRIA1P42261 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.02□□□□□ -0.17
GRIA1P42261 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GRIA1P42261 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC14.02□□□□□ -0.17
GRIA1P42261 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.02□□□□□ -0.17
GRIA1P42261 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GRIA1P42261 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
GRIA1P42261 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
GRIA1P42261 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
GRIA1P42261 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.01□□□□□ -0.17
GRIA1P42261 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC14.01□□□□□ -0.17
GRIA1P42261 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 SUPT20HL1-201ENST00000436466 2618 ntBASIC14.01□□□□□ -0.17
GRIA1P42261 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
GRIA1P42261 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 KRT8P31-201ENST00000504812 1408 ntBASIC14.01□□□□□ -0.17
GRIA1P42261 AC008132.1-202ENST00000342005 1389 ntBASIC14.01□□□□□ -0.17
GRIA1P42261 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
GRIA1P42261 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
GRIA1P42261 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
GRIA1P42261 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.01□□□□□ -0.17
GRIA1P42261 TUBB2BP1-201ENST00000404155 871 ntBASIC14.01□□□□□ -0.17
GRIA1P42261 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.01□□□□□ -0.17
GRIA1P42261 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.01□□□□□ -0.17
GRIA1P42261 AC092658.1-201ENST00000505836 891 ntBASIC14.01□□□□□ -0.17
GRIA1P42261 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
GRIA1P42261 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
GRIA1P42261 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.01□□□□□ -0.17
GRIA1P42261 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms