Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.44□□□□□ -0.42
HLA-DOBP13765 AC242376.1-201ENST00000559033 726 ntBASIC12.44□□□□□ -0.42
HLA-DOBP13765 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.44□□□□□ -0.42
HLA-DOBP13765 MIR3619-201ENST00000579667 83 ntBASIC12.44□□□□□ -0.42
HLA-DOBP13765 AC007326.1-201ENST00000604539 458 ntBASIC12.44□□□□□ -0.42
HLA-DOBP13765 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
HLA-DOBP13765 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
HLA-DOBP13765 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 AL355102.3-201ENST00000554299 1678 ntBASIC12.44□□□□□ -0.42
HLA-DOBP13765 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.44□□□□□ -0.42
HLA-DOBP13765 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.44□□□□□ -0.42
HLA-DOBP13765 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
HLA-DOBP13765 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.44□□□□□ -0.42
HLA-DOBP13765 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 MIR557-201ENST00000385239 98 ntBASIC12.43□□□□□ -0.42
HLA-DOBP13765 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 RPL8P2-201ENST00000430538 502 ntBASIC12.43□□□□□ -0.42
HLA-DOBP13765 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 AL353637.1-201ENST00000451571 732 ntBASIC12.43□□□□□ -0.42
HLA-DOBP13765 RN7SL67P-201ENST00000492147 296 ntBASIC12.43□□□□□ -0.42
HLA-DOBP13765 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 MIR3677-201ENST00000578964 60 ntBASIC12.43□□□□□ -0.42
HLA-DOBP13765 AC103810.3-201ENST00000583567 96 ntBASIC12.43□□□□□ -0.42
HLA-DOBP13765 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 LINC00567-201ENST00000569854 3409 ntBASIC12.43□□□□□ -0.42
HLA-DOBP13765 DGCR9-201ENST00000609630 2415 ntBASIC12.43□□□□□ -0.42
HLA-DOBP13765 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DOBP13765 FAM90A2P-201ENST00000511144 1395 ntBASIC12.43□□□□□ -0.42
HLA-DOBP13765 FAM90A25P-201ENST00000528404 1395 ntBASIC12.43□□□□□ -0.42
HLA-DOBP13765 AC245140.2-201ENST00000624054 1939 ntBASIC12.43□□□□□ -0.42
HLA-DOBP13765 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DOBP13765 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 AL137784.3-201ENST00000623858 2288 ntBASIC12.42□□□□□ -0.42
HLA-DOBP13765 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms