Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 FAM90A2P-201ENST00000511144 1395 ntBASIC14.34□□□□□ -0.11
CD48P09326 FAM90A25P-201ENST00000528404 1395 ntBASIC14.34□□□□□ -0.11
CD48P09326 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CD48P09326 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CD48P09326 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD48P09326 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CD48P09326 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CD48P09326 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD48P09326 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CD48P09326 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.33□□□□□ -0.11
CD48P09326 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD48P09326 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.33□□□□□ -0.11
CD48P09326 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD48P09326 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.33□□□□□ -0.11
CD48P09326 AC004899.2-201ENST00000622993 3860 ntBASIC14.33□□□□□ -0.12
CD48P09326 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
CD48P09326 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CD48P09326 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CD48P09326 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
CD48P09326 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.33□□□□□ -0.12
CD48P09326 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.33□□□□□ -0.12
CD48P09326 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.33□□□□□ -0.12
CD48P09326 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.33□□□□□ -0.12
CD48P09326 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CD48P09326 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CD48P09326 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CD48P09326 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC14.33□□□□□ -0.12
CD48P09326 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.33□□□□□ -0.12
CD48P09326 AC145285.5-201ENST00000562217 361 ntBASIC14.33□□□□□ -0.12
CD48P09326 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.33□□□□□ -0.12
CD48P09326 MIR3619-201ENST00000579667 83 ntBASIC14.33□□□□□ -0.12
CD48P09326 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.33□□□□□ -0.12
CD48P09326 AL353770.1-201ENST00000614915 403 ntBASIC14.33□□□□□ -0.12
CD48P09326 AC009560.1-201ENST00000620208 434 ntBASIC14.33□□□□□ -0.12
CD48P09326 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.33□□□□□ -0.12
CD48P09326 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 AP000437.1-201ENST00000624057 2085 ntBASIC14.33□□□□□ -0.12
CD48P09326 AC002350.2-201ENST00000623894 1828 ntBASIC14.33□□□□□ -0.12
CD48P09326 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.33□□□□□ -0.12
CD48P09326 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD48P09326 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 PCDHB19P-202ENST00000625133 2914 ntBASIC14.32□□□□□ -0.12
CD48P09326 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC14.32□□□□□ -0.12
CD48P09326 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC14.32□□□□□ -0.12
CD48P09326 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CD48P09326 AL139385.1-201ENST00000611744 3272 ntBASIC14.32□□□□□ -0.12
CD48P09326 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
CD48P09326 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 AC006372.4-201ENST00000624122 1543 ntBASIC14.32□□□□□ -0.12
CD48P09326 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CD48P09326 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.32□□□□□ -0.12
CD48P09326 AC106827.1-201ENST00000366454 431 ntBASIC14.32□□□□□ -0.12
CD48P09326 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CD48P09326 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.32□□□□□ -0.12
CD48P09326 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD48P09326 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.32□□□□□ -0.12
CD48P09326 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.32□□□□□ -0.12
CD48P09326 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.32□□□□□ -0.12
CD48P09326 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CD48P09326 FTH1P22-201ENST00000456305 520 ntBASIC14.32□□□□□ -0.12
CD48P09326 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
CD48P09326 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms