Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC12.81□□□□□ -0.36
THBS1P07996 MEG3_2.1-201ENST00000611456 105 ntBASIC12.81□□□□□ -0.36
THBS1P07996 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.81□□□□□ -0.36
THBS1P07996 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC12.81□□□□□ -0.36
THBS1P07996 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.81□□□□□ -0.36
THBS1P07996 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.81□□□□□ -0.36
THBS1P07996 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.81□□□□□ -0.36
THBS1P07996 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
THBS1P07996 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
THBS1P07996 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
THBS1P07996 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
THBS1P07996 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.8□□□□□ -0.36
THBS1P07996 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.8□□□□□ -0.36
THBS1P07996 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.8□□□□□ -0.36
THBS1P07996 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.8□□□□□ -0.36
THBS1P07996 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
THBS1P07996 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.8□□□□□ -0.36
THBS1P07996 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
THBS1P07996 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
THBS1P07996 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
THBS1P07996 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 AC125807.2-201ENST00000513358 3514 ntBASIC12.8□□□□□ -0.36
THBS1P07996 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
THBS1P07996 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
THBS1P07996 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 MIR645-201ENST00000385283 94 ntBASIC12.8□□□□□ -0.36
THBS1P07996 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC12.8□□□□□ -0.36
THBS1P07996 BANF1P3-201ENST00000412556 261 ntBASIC12.8□□□□□ -0.36
THBS1P07996 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.8□□□□□ -0.36
THBS1P07996 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.8□□□□□ -0.36
THBS1P07996 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.8□□□□□ -0.36
THBS1P07996 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC12.8□□□□□ -0.36
THBS1P07996 PARP8-218ENST00000513738 596 ntTSL 4 BASIC12.8□□□□□ -0.36
THBS1P07996 POU5F1P2-201ENST00000521750 823 ntBASIC12.8□□□□□ -0.36
THBS1P07996 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
THBS1P07996 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.8□□□□□ -0.36
THBS1P07996 AC009712.1-201ENST00000564938 316 ntBASIC12.8□□□□□ -0.36
THBS1P07996 NDUFV2P1-201ENST00000596415 907 ntBASIC12.8□□□□□ -0.36
THBS1P07996 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.8□□□□□ -0.36
THBS1P07996 AL353729.2-201ENST00000605859 1249 ntBASIC12.8□□□□□ -0.36
THBS1P07996 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.8□□□□□ -0.36
THBS1P07996 AC022960.2-201ENST00000616300 666 ntBASIC12.8□□□□□ -0.36
THBS1P07996 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.8□□□□□ -0.36
THBS1P07996 TUBBP5-203ENST00000508529 1334 ntBASIC12.8□□□□□ -0.36
THBS1P07996 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
THBS1P07996 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.8□□□□□ -0.36
THBS1P07996 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.8□□□□□ -0.36
THBS1P07996 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
THBS1P07996 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
THBS1P07996 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 KRT8P18-201ENST00000413425 1445 ntBASIC12.79□□□□□ -0.36
THBS1P07996 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 RCC2P5-201ENST00000492126 1487 ntBASIC12.79□□□□□ -0.36
THBS1P07996 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.79□□□□□ -0.36
THBS1P07996 KRT8P19-201ENST00000551916 1455 ntBASIC12.79□□□□□ -0.36
THBS1P07996 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.79□□□□□ -0.36
THBS1P07996 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
THBS1P07996 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.79□□□□□ -0.36
THBS1P07996 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.79□□□□□ -0.36
THBS1P07996 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
THBS1P07996 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms