Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
COLCA2A8K830 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
COLCA2A8K830 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
COLCA2A8K830 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
COLCA2A8K830 ETFDH-201ENST00000307738 1903 ntTSL 2 BASIC10.5□□□□□ -0.73
COLCA2A8K830 TMEFF2-202ENST00000392314 2842 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
COLCA2A8K830 NAB1-201ENST00000337386 4358 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
COLCA2A8K830 AL353611.2-201ENST00000625008 2897 ntBASIC10.5□□□□□ -0.73
COLCA2A8K830 MMP2-203ENST00000543485 1978 ntTSL 2 BASIC10.5□□□□□ -0.73
COLCA2A8K830 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC10.5□□□□□ -0.73
COLCA2A8K830 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
COLCA2A8K830 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
COLCA2A8K830 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
COLCA2A8K830 TMEM184B-201ENST00000361684 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
COLCA2A8K830 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
COLCA2A8K830 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
COLCA2A8K830 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC10.5□□□□□ -0.73
COLCA2A8K830 ZNF132-201ENST00000254166 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
COLCA2A8K830 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 AL031846.2-201ENST00000624656 3671 ntBASIC10.49□□□□□ -0.73
COLCA2A8K830 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
COLCA2A8K830 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 AL031587.5-201ENST00000624344 1849 ntBASIC10.49□□□□□ -0.73
COLCA2A8K830 ARL3-201ENST00000260746 3844 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
COLCA2A8K830 PTOV1-AS1-202ENST00000600742 3181 ntTSL 2 BASIC10.49□□□□□ -0.73
COLCA2A8K830 POLE3-202ENST00000374171 2191 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
COLCA2A8K830 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
COLCA2A8K830 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
COLCA2A8K830 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 NDUFAF7-202ENST00000336237 1869 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC10.49□□□□□ -0.73
COLCA2A8K830 ITPRIP-202ENST00000337478 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 PCGF2-204ENST00000616199 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC10.49□□□□□ -0.73
COLCA2A8K830 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC10.49□□□□□ -0.73
COLCA2A8K830 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC10.49□□□□□ -0.73
COLCA2A8K830 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
COLCA2A8K830 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
COLCA2A8K830 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 PUDPP3-201ENST00000445368 636 ntBASIC10.49□□□□□ -0.73
COLCA2A8K830 HCG4B-203ENST00000450128 991 ntBASIC10.49□□□□□ -0.73
COLCA2A8K830 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC10.49□□□□□ -0.73
COLCA2A8K830 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
COLCA2A8K830 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC10.49□□□□□ -0.73
COLCA2A8K830 PTK2-216ENST00000519881 863 ntTSL 3 BASIC10.49□□□□□ -0.73
COLCA2A8K830 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC10.49□□□□□ -0.73
COLCA2A8K830 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC10.49□□□□□ -0.73
COLCA2A8K830 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC10.49□□□□□ -0.73
COLCA2A8K830 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 AL356740.1-201ENST00000602192 1297 ntBASIC10.49□□□□□ -0.73
COLCA2A8K830 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC10.49□□□□□ -0.73
COLCA2A8K830 GRAMD1B-203ENST00000456860 2805 ntTSL 2 BASIC10.49□□□□□ -0.73
COLCA2A8K830 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
COLCA2A8K830 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
COLCA2A8K830 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 MAP2K6-206ENST00000590474 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 CTBP2-201ENST00000309035 3669 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 FAM131A-201ENST00000310585 3677 ntTSL 2 BASIC10.49□□□□□ -0.73
COLCA2A8K830 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC10.49□□□□□ -0.73
COLCA2A8K830 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC10.49□□□□□ -0.73
COLCA2A8K830 IRF5-213ENST00000489702 2988 ntTSL 5 BASIC10.49□□□□□ -0.73
COLCA2A8K830 BCAS1-201ENST00000371435 3020 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 COLQ-203ENST00000383788 3005 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC10.49□□□□□ -0.73
COLCA2A8K830 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
COLCA2A8K830 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 PRR5L-216ENST00000530639 2291 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
COLCA2A8K830 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
COLCA2A8K830 IGHMBP2-201ENST00000255078 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 RPL10-204ENST00000424325 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
COLCA2A8K830 THRAP3P1-201ENST00000411753 2786 ntBASIC10.48□□□□□ -0.73
COLCA2A8K830 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
COLCA2A8K830 FYN-203ENST00000368667 2416 ntAPPRIS P4 TSL 5 BASIC10.48□□□□□ -0.73
COLCA2A8K830 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
COLCA2A8K830 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
COLCA2A8K830 PRLR-211ENST00000511486 1566 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
COLCA2A8K830 MAP3K3-208ENST00000579585 3352 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
COLCA2A8K830 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC10.48□□□□□ -0.73
COLCA2A8K830 GBE1-201ENST00000429644 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
COLCA2A8K830 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
COLCA2A8K830 NTM-221ENST00000539799 2550 ntTSL 5 BASIC10.48□□□□□ -0.73
COLCA2A8K830 VIPAS39-211ENST00000557658 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
COLCA2A8K830 GUCD1-213ENST00000621833 3584 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
COLCA2A8K830 TNFSF13B-202ENST00000430559 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
COLCA2A8K830 KLC4-215ENST00000479388 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
COLCA2A8K830 ZNF124-201ENST00000340684 1674 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms