Protein–RNA interactions for Protein: A6PVI3

NCBP2L, Nuclear cap-binding protein subunit 2-like, humanhuman

Known RBP Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2LA6PVI3 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC11.27□□□□□ -0.61
NCBP2LA6PVI3 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 AC004554.1-201ENST00000422830 1468 ntBASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 AL807761.2-201ENST00000422849 729 ntBASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 DUTP3-201ENST00000450025 415 ntBASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 RN7SL67P-201ENST00000492147 296 ntBASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 AC116345.2-201ENST00000512837 523 ntBASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 AC242376.1-201ENST00000559033 726 ntBASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 MIR4754-201ENST00000582477 89 ntBASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 AL021578.1-201ENST00000613646 709 ntBASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 CAP2P1-201ENST00000557743 1390 ntBASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
NCBP2LA6PVI3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
NCBP2LA6PVI3 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NCBP2LA6PVI3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
NCBP2LA6PVI3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
NCBP2LA6PVI3 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NCBP2LA6PVI3 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
NCBP2LA6PVI3 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC11.25□□□□□ -0.61
NCBP2LA6PVI3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC11.25□□□□□ -0.61
NCBP2LA6PVI3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms