Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
ATP6V0A4Q9HBG4 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC15.42■□□□□ 0.06
ATP6V0A4Q9HBG4 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ATP6V0A4Q9HBG4 NUTM2HP-201ENST00000442076 2498 ntBASIC15.42■□□□□ 0.06
ATP6V0A4Q9HBG4 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATP6V0A4Q9HBG4 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
ATP6V0A4Q9HBG4 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
ATP6V0A4Q9HBG4 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ATP6V0A4Q9HBG4 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.42■□□□□ 0.06
ATP6V0A4Q9HBG4 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.42■□□□□ 0.06
ATP6V0A4Q9HBG4 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ATP6V0A4Q9HBG4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ATP6V0A4Q9HBG4 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.42■□□□□ 0.06
ATP6V0A4Q9HBG4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 AC105206.1-202ENST00000314927 2368 ntBASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 AC023794.5-201ENST00000564380 2157 ntBASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 CES1P1-201ENST00000421606 1704 ntBASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 RN7SL375P-201ENST00000492442 298 ntBASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 RNA5SP406-201ENST00000516106 112 ntBASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 LINC00431-202ENST00000636375 159 ntBASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 SALL4P6-201ENST00000429385 1691 ntBASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 NRADDP-202ENST00000641269 1585 ntBASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ATP6V0A4Q9HBG4 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 RPL35P9-201ENST00000446059 350 ntBASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 AC007279.1-201ENST00000448547 837 ntBASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 STK24P1-201ENST00000455035 1291 ntBASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 LINC00634-202ENST00000505157 222 ntBASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 IGHV1-12-201ENST00000518307 205 ntBASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 AL132994.1-201ENST00000554098 400 ntBASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 MIR5196-201ENST00000578146 115 ntBASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 MIR4326-201ENST00000582203 59 ntBASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 AL009176.1-201ENST00000607876 650 ntBASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ATP6V0A4Q9HBG4 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 227 ms