Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UPF3BQ9BZI7 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
UPF3BQ9BZI7 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
UPF3BQ9BZI7 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
UPF3BQ9BZI7 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UPF3BQ9BZI7 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
UPF3BQ9BZI7 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
UPF3BQ9BZI7 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC16.58■□□□□ 0.25
UPF3BQ9BZI7 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 KRT17P5-201ENST00000332088 839 ntBASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 SCARNA20.5-201ENST00000516991 142 ntBASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 USP3-204ENST00000540797 5474 ntTSL 2 BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPF3BQ9BZI7 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 MIR4722-201ENST00000578292 60 ntBASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
UPF3BQ9BZI7 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPF3BQ9BZI7 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPF3BQ9BZI7 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPF3BQ9BZI7 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC16.56■□□□□ 0.24
UPF3BQ9BZI7 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPF3BQ9BZI7 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC16.56■□□□□ 0.24
UPF3BQ9BZI7 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
UPF3BQ9BZI7 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
UPF3BQ9BZI7 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPF3BQ9BZI7 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPF3BQ9BZI7 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPF3BQ9BZI7 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms