Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TREX2Q9BQ50 PCDHA6-201ENST00000378126 3267 ntBASIC13.12□□□□□ -0.31
TREX2Q9BQ50 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC13.12□□□□□ -0.31
TREX2Q9BQ50 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TREX2Q9BQ50 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TREX2Q9BQ50 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TREX2Q9BQ50 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 LINC00638-201ENST00000555578 2518 ntBASIC13.11□□□□□ -0.31
TREX2Q9BQ50 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 AL355334.1-201ENST00000417713 215 ntBASIC13.11□□□□□ -0.31
TREX2Q9BQ50 AC136604.1-202ENST00000425471 771 ntBASIC13.11□□□□□ -0.31
TREX2Q9BQ50 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 NPM1P43-201ENST00000558669 786 ntBASIC13.11□□□□□ -0.31
TREX2Q9BQ50 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 AC090164.2-201ENST00000611487 516 ntBASIC13.11□□□□□ -0.31
TREX2Q9BQ50 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TREX2Q9BQ50 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 AC125807.2-201ENST00000513358 3514 ntBASIC13.1□□□□□ -0.31
TREX2Q9BQ50 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 ISCA2P1-201ENST00000425548 448 ntBASIC13.1□□□□□ -0.31
TREX2Q9BQ50 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 SNORD3B-2-202ENST00000571722 791 ntBASIC13.1□□□□□ -0.31
TREX2Q9BQ50 MIR4754-201ENST00000582477 89 ntBASIC13.1□□□□□ -0.31
TREX2Q9BQ50 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 COX6A1P2-201ENST00000620597 330 ntBASIC13.1□□□□□ -0.31
TREX2Q9BQ50 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TREX2Q9BQ50 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 231.1 ms