Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 IDS-203ENST00000428056 1213 ntTSL 2 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 PPOX-204ENST00000462866 473 ntTSL 5 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 PFN2-212ENST00000490975 858 ntTSL 4 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 CES1P2-201ENST00000566467 1242 ntBASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 HMGB1P24-201ENST00000611897 328 ntBASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHKBP1Q8TBC3 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.52□□□□□ -0.08
SHKBP1Q8TBC3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHKBP1Q8TBC3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHKBP1Q8TBC3 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHKBP1Q8TBC3 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.52□□□□□ -0.08
SHKBP1Q8TBC3 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SHKBP1Q8TBC3 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.52□□□□□ -0.08
SHKBP1Q8TBC3 KRT8P24-201ENST00000560290 1559 ntBASIC14.52□□□□□ -0.08
SHKBP1Q8TBC3 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHKBP1Q8TBC3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.52□□□□□ -0.08
SHKBP1Q8TBC3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHKBP1Q8TBC3 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.52□□□□□ -0.08
SHKBP1Q8TBC3 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHKBP1Q8TBC3 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.52□□□□□ -0.08
SHKBP1Q8TBC3 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC14.52□□□□□ -0.08
SHKBP1Q8TBC3 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.52□□□□□ -0.08
SHKBP1Q8TBC3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 BPIFB5P-201ENST00000457066 1099 ntBASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SHKBP1Q8TBC3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 AC111170.3-201ENST00000624282 2464 ntBASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 SURF4-203ENST00000371991 715 ntTSL 3 BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 LINP1-201ENST00000417112 917 ntTSL 2 BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 ALG1L3P-201ENST00000503331 765 ntBASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC14.51□□□□□ -0.09
SHKBP1Q8TBC3 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms