Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.54□□□□□ -0.4
APOBEC1P41238 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.54□□□□□ -0.4
APOBEC1P41238 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
APOBEC1P41238 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
APOBEC1P41238 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
APOBEC1P41238 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.53□□□□□ -0.4
APOBEC1P41238 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.53□□□□□ -0.4
APOBEC1P41238 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
APOBEC1P41238 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 AC019109.1-201ENST00000401725 1874 ntBASIC12.53□□□□□ -0.4
APOBEC1P41238 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
APOBEC1P41238 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.53□□□□□ -0.4
APOBEC1P41238 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.53□□□□□ -0.4
APOBEC1P41238 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.53□□□□□ -0.4
APOBEC1P41238 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
APOBEC1P41238 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.53□□□□□ -0.4
APOBEC1P41238 AL627422.1-201ENST00000434104 580 ntBASIC12.53□□□□□ -0.4
APOBEC1P41238 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 NDUFS6P1-201ENST00000485187 316 ntBASIC12.53□□□□□ -0.4
APOBEC1P41238 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.53□□□□□ -0.4
APOBEC1P41238 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.53□□□□□ -0.4
APOBEC1P41238 OR5BD1P-201ENST00000532527 817 ntBASIC12.53□□□□□ -0.4
APOBEC1P41238 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.53□□□□□ -0.4
APOBEC1P41238 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.53□□□□□ -0.4
APOBEC1P41238 SNORD3B-1-201ENST00000577988 758 ntBASIC12.53□□□□□ -0.4
APOBEC1P41238 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.53□□□□□ -0.4
APOBEC1P41238 MIR2392-201ENST00000584881 84 ntBASIC12.53□□□□□ -0.4
APOBEC1P41238 MIR4522-201ENST00000584932 87 ntBASIC12.53□□□□□ -0.4
APOBEC1P41238 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
APOBEC1P41238 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.53□□□□□ -0.4
APOBEC1P41238 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
APOBEC1P41238 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.53□□□□□ -0.4
APOBEC1P41238 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
APOBEC1P41238 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.53□□□□□ -0.4
APOBEC1P41238 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.53□□□□□ -0.4
APOBEC1P41238 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
APOBEC1P41238 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.53□□□□□ -0.4
APOBEC1P41238 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
APOBEC1P41238 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.53□□□□□ -0.4
APOBEC1P41238 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC1P41238 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
APOBEC1P41238 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOBEC1P41238 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
APOBEC1P41238 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOBEC1P41238 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOBEC1P41238 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.52□□□□□ -0.4
APOBEC1P41238 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
APOBEC1P41238 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
APOBEC1P41238 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
APOBEC1P41238 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOBEC1P41238 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.52□□□□□ -0.4
APOBEC1P41238 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
APOBEC1P41238 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
APOBEC1P41238 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.52□□□□□ -0.41
APOBEC1P41238 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
APOBEC1P41238 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.52□□□□□ -0.41
APOBEC1P41238 GGTLC4P-201ENST00000402176 664 ntBASIC12.52□□□□□ -0.41
APOBEC1P41238 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 RPL3P2-204ENST00000413027 1203 ntBASIC12.52□□□□□ -0.41
APOBEC1P41238 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms