Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RB1P06400 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RB1P06400 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RB1P06400 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC14.48□□□□□ -0.09
RB1P06400 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RB1P06400 OLA1P2-201ENST00000395519 1264 ntBASIC14.48□□□□□ -0.09
RB1P06400 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RB1P06400 FTH1P18-201ENST00000412071 549 ntBASIC14.48□□□□□ -0.09
RB1P06400 TPT1P9-201ENST00000413759 514 ntBASIC14.48□□□□□ -0.09
RB1P06400 DNM1P46-202ENST00000415963 882 ntBASIC14.48□□□□□ -0.09
RB1P06400 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RB1P06400 AC113398.1-201ENST00000464124 406 ntBASIC14.48□□□□□ -0.09
RB1P06400 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC14.48□□□□□ -0.09
RB1P06400 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC14.48□□□□□ -0.09
RB1P06400 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC14.48□□□□□ -0.09
RB1P06400 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RB1P06400 PCTP-206ENST00000573500 919 ntTSL 3 BASIC14.48□□□□□ -0.09
RB1P06400 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC14.48□□□□□ -0.09
RB1P06400 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RB1P06400 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.48□□□□□ -0.09
RB1P06400 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RB1P06400 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RB1P06400 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
RB1P06400 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.48□□□□□ -0.09
RB1P06400 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.48□□□□□ -0.09
RB1P06400 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
RB1P06400 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
RB1P06400 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RB1P06400 AC015802.1-201ENST00000588104 1449 ntBASIC14.48□□□□□ -0.09
RB1P06400 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RB1P06400 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RB1P06400 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RB1P06400 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC14.48□□□□□ -0.09
RB1P06400 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.48□□□□□ -0.09
RB1P06400 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RB1P06400 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RB1P06400 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.47□□□□□ -0.09
RB1P06400 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RB1P06400 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 AC020910.6-201ENST00000623084 1459 ntBASIC14.47□□□□□ -0.09
RB1P06400 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RB1P06400 SERF2-205ENST00000403425 690 ntTSL 2 BASIC14.47□□□□□ -0.09
RB1P06400 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC14.47□□□□□ -0.09
RB1P06400 RPL14-203ENST00000416518 812 ntTSL 3 BASIC14.47□□□□□ -0.09
RB1P06400 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC14.47□□□□□ -0.09
RB1P06400 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC14.47□□□□□ -0.09
RB1P06400 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC14.47□□□□□ -0.09
RB1P06400 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC14.47□□□□□ -0.09
RB1P06400 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC14.47□□□□□ -0.09
RB1P06400 EEF1DP7-201ENST00000580496 513 ntBASIC14.47□□□□□ -0.09
RB1P06400 CLPP-205ENST00000596605 646 ntTSL 2 BASIC14.47□□□□□ -0.09
RB1P06400 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC14.47□□□□□ -0.09
RB1P06400 SNX20-205ENST00000610485 557 ntTSL 5 BASIC14.47□□□□□ -0.09
RB1P06400 AC006986.1-201ENST00000612764 241 ntBASIC14.47□□□□□ -0.09
RB1P06400 AC244097.1-201ENST00000621631 1216 ntBASIC14.47□□□□□ -0.09
RB1P06400 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.47□□□□□ -0.09
RB1P06400 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RB1P06400 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.47□□□□□ -0.09
RB1P06400 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.47□□□□□ -0.09
RB1P06400 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.46□□□□□ -0.09
RB1P06400 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
RB1P06400 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RB1P06400 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.46□□□□□ -0.09
RB1P06400 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 AC024075.2-201ENST00000598112 1473 ntBASIC14.46□□□□□ -0.09
RB1P06400 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
RB1P06400 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms