Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 NUTM2A-201ENST00000381689 3974 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
APOC3P02656 LILRB2-204ENST00000391749 2286 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
APOC3P02656 URGCP-205ENST00000443736 3596 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
APOC3P02656 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
APOC3P02656 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
APOC3P02656 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC11.02□□□□□ -0.64
APOC3P02656 SIRPA-201ENST00000356025 3867 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
APOC3P02656 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
APOC3P02656 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC11.02□□□□□ -0.64
APOC3P02656 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC11.02□□□□□ -0.64
APOC3P02656 SOX9-201ENST00000245479 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 ATP8A1-201ENST00000264449 8209 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 KIAA0513-206ENST00000566428 7772 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 CYP1A1-202ENST00000395048 2608 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 KBTBD6-201ENST00000379485 5178 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
APOC3P02656 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
APOC3P02656 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.02□□□□□ -0.65
APOC3P02656 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC11.02□□□□□ -0.65
APOC3P02656 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC11.02□□□□□ -0.65
APOC3P02656 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.02□□□□□ -0.65
APOC3P02656 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC11.02□□□□□ -0.65
APOC3P02656 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.02□□□□□ -0.65
APOC3P02656 AC102953.1-201ENST00000445345 498 ntTSL 2 BASIC11.02□□□□□ -0.65
APOC3P02656 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC11.02□□□□□ -0.65
APOC3P02656 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.02□□□□□ -0.65
APOC3P02656 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC11.02□□□□□ -0.65
APOC3P02656 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.02□□□□□ -0.65
APOC3P02656 AL136038.3-201ENST00000561909 1096 ntBASIC11.02□□□□□ -0.65
APOC3P02656 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.02□□□□□ -0.65
APOC3P02656 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.02□□□□□ -0.65
APOC3P02656 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.02□□□□□ -0.65
APOC3P02656 MIR3180-1-201ENST00000580374 94 ntBASIC11.02□□□□□ -0.65
APOC3P02656 MIR3180-3-201ENST00000584616 94 ntBASIC11.02□□□□□ -0.65
APOC3P02656 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.02□□□□□ -0.65
APOC3P02656 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC11.02□□□□□ -0.65
APOC3P02656 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC11.02□□□□□ -0.65
APOC3P02656 ABBA01031660.1-201ENST00000635219 756 ntBASIC11.02□□□□□ -0.65
APOC3P02656 KCNAB1-201ENST00000302490 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC11.02□□□□□ -0.65
APOC3P02656 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 ISL1-201ENST00000230658 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 ABCB8-222ENST00000542328 4371 ntTSL 2 BASIC11.02□□□□□ -0.65
APOC3P02656 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 WASL-201ENST00000223023 4435 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
APOC3P02656 AC241952.1-201ENST00000612480 6897 ntBASIC11.02□□□□□ -0.65
APOC3P02656 LRRC37A7P-201ENST00000583900 2759 ntBASIC11.02□□□□□ -0.65
APOC3P02656 LIFR-AS1-201ENST00000500733 3803 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 ZFAT-201ENST00000377838 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
APOC3P02656 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC11.02□□□□□ -0.65
APOC3P02656 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
APOC3P02656 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC11.02□□□□□ -0.65
APOC3P02656 ITGA7-213ENST00000555728 3930 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
APOC3P02656 PFKM-202ENST00000340802 3176 ntTSL 2 BASIC11.02□□□□□ -0.65
APOC3P02656 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
APOC3P02656 SLC25A36-208ENST00000507429 3537 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOC3P02656 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC11.01□□□□□ -0.65
APOC3P02656 UBASH3A-202ENST00000319294 2504 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOC3P02656 TRMT10B-201ENST00000297994 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOC3P02656 BAHD1-202ENST00000560846 4432 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOC3P02656 CSF3R-202ENST00000361632 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOC3P02656 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
APOC3P02656 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC11.01□□□□□ -0.65
APOC3P02656 GDA-203ENST00000376986 1771 ntTSL 2 BASIC11.01□□□□□ -0.65
APOC3P02656 Z98885.3-201ENST00000624882 1757 ntBASIC11.01□□□□□ -0.65
APOC3P02656 DMBX1-202ENST00000371956 2882 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOC3P02656 SCAMP5-203ENST00000562212 3400 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOC3P02656 ORAI2-201ENST00000356387 10811 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
APOC3P02656 HERC2P3-208ENST00000430598 4279 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOC3P02656 RIPOR1-205ENST00000540839 4260 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
APOC3P02656 RNF24-202ENST00000358395 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOC3P02656 IKBKB-230ENST00000629753 4069 ntTSL 2 BASIC11.01□□□□□ -0.65
APOC3P02656 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOC3P02656 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOC3P02656 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOC3P02656 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOC3P02656 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOC3P02656 EMD-201ENST00000369835 966 ntTSL 3 BASIC11.01□□□□□ -0.65
APOC3P02656 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.01□□□□□ -0.65
APOC3P02656 AL645937.2-201ENST00000396808 931 ntBASIC11.01□□□□□ -0.65
APOC3P02656 COA5-202ENST00000409997 557 ntTSL 4 BASIC11.01□□□□□ -0.65
APOC3P02656 DAP-202ENST00000432074 1048 ntTSL 2 BASIC11.01□□□□□ -0.65
APOC3P02656 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC11.01□□□□□ -0.65
APOC3P02656 FGFR3P6-201ENST00000457012 610 ntBASIC11.01□□□□□ -0.65
APOC3P02656 SNORA78-201ENST00000459373 127 ntBASIC11.01□□□□□ -0.65
APOC3P02656 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.01□□□□□ -0.65
APOC3P02656 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC11.01□□□□□ -0.65
APOC3P02656 GCOM2-201ENST00000509133 1104 ntBASIC11.01□□□□□ -0.65
APOC3P02656 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.01□□□□□ -0.65
APOC3P02656 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC11.01□□□□□ -0.65
APOC3P02656 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms