Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-2O95096 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
NKX2-2O95096 AL513497.1-201ENST00000624273 2083 ntBASIC12.76□□□□□ -0.37
NKX2-2O95096 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
NKX2-2O95096 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-2O95096 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX2-2O95096 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-2O95096 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.75□□□□□ -0.37
NKX2-2O95096 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
NKX2-2O95096 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 AC005562.1-201ENST00000583030 3219 ntBASIC12.75□□□□□ -0.37
NKX2-2O95096 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.75□□□□□ -0.37
NKX2-2O95096 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
NKX2-2O95096 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC12.75□□□□□ -0.37
NKX2-2O95096 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.75□□□□□ -0.37
NKX2-2O95096 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
NKX2-2O95096 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.75□□□□□ -0.37
NKX2-2O95096 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
NKX2-2O95096 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.75□□□□□ -0.37
NKX2-2O95096 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 AL627422.1-201ENST00000434104 580 ntBASIC12.75□□□□□ -0.37
NKX2-2O95096 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.75□□□□□ -0.37
NKX2-2O95096 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.75□□□□□ -0.37
NKX2-2O95096 STK24P1-201ENST00000455035 1291 ntBASIC12.75□□□□□ -0.37
NKX2-2O95096 CHCHD2P9-201ENST00000461726 456 ntBASIC12.75□□□□□ -0.37
NKX2-2O95096 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
NKX2-2O95096 PRSS3P1-201ENST00000503996 742 ntBASIC12.75□□□□□ -0.37
NKX2-2O95096 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.75□□□□□ -0.37
NKX2-2O95096 MRPL22P1-201ENST00000505398 616 ntBASIC12.75□□□□□ -0.37
NKX2-2O95096 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.75□□□□□ -0.37
NKX2-2O95096 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.75□□□□□ -0.37
NKX2-2O95096 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.75□□□□□ -0.37
NKX2-2O95096 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
NKX2-2O95096 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.75□□□□□ -0.37
NKX2-2O95096 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.75□□□□□ -0.37
NKX2-2O95096 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.75□□□□□ -0.37
NKX2-2O95096 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC12.75□□□□□ -0.37
NKX2-2O95096 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.75□□□□□ -0.37
NKX2-2O95096 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
NKX2-2O95096 AC026271.4-201ENST00000578214 1833 ntBASIC12.75□□□□□ -0.37
NKX2-2O95096 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC12.75□□□□□ -0.37
NKX2-2O95096 AL133499.1-201ENST00000596207 608 ntBASIC12.75□□□□□ -0.37
NKX2-2O95096 AC005632.3-201ENST00000605544 308 ntBASIC12.75□□□□□ -0.37
NKX2-2O95096 AL359091.4-201ENST00000610052 409 ntBASIC12.75□□□□□ -0.37
NKX2-2O95096 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.75□□□□□ -0.37
NKX2-2O95096 DDC-212ENST00000615193 1674 ntTSL 3 BASIC12.75□□□□□ -0.37
NKX2-2O95096 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.75□□□□□ -0.37
NKX2-2O95096 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
NKX2-2O95096 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.75□□□□□ -0.37
NKX2-2O95096 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
NKX2-2O95096 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-2O95096 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.74□□□□□ -0.37
NKX2-2O95096 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.74□□□□□ -0.37
NKX2-2O95096 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 AC010970.1-201ENST00000445125 1848 ntBASIC12.74□□□□□ -0.37
NKX2-2O95096 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NKX2-2O95096 HLA-DMA-203ENST00000395305 777 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms