Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 AC119751.2-201ENST00000504529 210 ntBASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 RHOQP1-201ENST00000555758 579 ntBASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 AC005324.6-201ENST00000587972 613 ntBASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 AC009542.2-202ENST00000619004 1067 ntBASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 AOC4P-203ENST00000566825 2289 ntBASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.1■□□□□ 0.17
CHAMP1Q96JM3 AC245140.2-201ENST00000624054 1939 ntBASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 CSF2RBP1-201ENST00000447905 391 ntBASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 HSPB1P2-201ENST00000448722 546 ntBASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 EIF4HP1-201ENST00000453115 687 ntBASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 AC104073.2-201ENST00000453737 312 ntBASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 AC099548.2-209ENST00000480264 625 ntBASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 RPSAP36-202ENST00000494591 1261 ntBASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 AHCYP4-201ENST00000419201 1315 ntBASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 AL358781.1-202ENST00000321081 1360 ntBASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHAMP1Q96JM3 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHAMP1Q96JM3 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC16.08■□□□□ 0.17
CHAMP1Q96JM3 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CHAMP1Q96JM3 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC16.08■□□□□ 0.17
CHAMP1Q96JM3 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
CHAMP1Q96JM3 AC004899.1-201ENST00000424687 1714 ntBASIC16.08■□□□□ 0.17
CHAMP1Q96JM3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
CHAMP1Q96JM3 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHAMP1Q96JM3 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms