Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN6P56747 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN6P56747 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN6P56747 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN6P56747 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN6P56747 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN6P56747 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN6P56747 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CLDN6P56747 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN6P56747 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN6P56747 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CLDN6P56747 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CLDN6P56747 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN6P56747 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CLDN6P56747 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CLDN6P56747 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN6P56747 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.27□□□□□ -0.28
CLDN6P56747 AC113367.3-201ENST00000508316 1912 ntBASIC13.27□□□□□ -0.28
CLDN6P56747 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.27□□□□□ -0.28
CLDN6P56747 PTENP1-202ENST00000532280 3996 ntBASIC13.27□□□□□ -0.28
CLDN6P56747 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN6P56747 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN6P56747 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN6P56747 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN6P56747 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN6P56747 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.27□□□□□ -0.29
CLDN6P56747 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN6P56747 SIRPB3P-201ENST00000340424 1216 ntBASIC13.27□□□□□ -0.29
CLDN6P56747 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN6P56747 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC13.27□□□□□ -0.29
CLDN6P56747 FDPSP7-201ENST00000429043 1054 ntBASIC13.27□□□□□ -0.29
CLDN6P56747 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC13.27□□□□□ -0.29
CLDN6P56747 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC13.27□□□□□ -0.29
CLDN6P56747 KRT19P4-201ENST00000443208 943 ntBASIC13.27□□□□□ -0.29
CLDN6P56747 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN6P56747 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC13.27□□□□□ -0.29
CLDN6P56747 BCRP4-201ENST00000506079 804 ntBASIC13.27□□□□□ -0.29
CLDN6P56747 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC13.27□□□□□ -0.29
CLDN6P56747 AC090510.3-201ENST00000615831 821 ntBASIC13.27□□□□□ -0.29
CLDN6P56747 MIR8071-1-201ENST00000616769 65 ntBASIC13.27□□□□□ -0.29
CLDN6P56747 MIR8071-2-201ENST00000616772 65 ntBASIC13.27□□□□□ -0.29
CLDN6P56747 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CLDN6P56747 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.27□□□□□ -0.29
CLDN6P56747 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN6P56747 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC13.27□□□□□ -0.29
CLDN6P56747 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN6P56747 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CLDN6P56747 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.27□□□□□ -0.29
CLDN6P56747 AL139158.3-201ENST00000641212 1562 ntBASIC13.27□□□□□ -0.29
CLDN6P56747 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CLDN6P56747 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN6P56747 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN6P56747 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN6P56747 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN6P56747 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.27□□□□□ -0.29
CLDN6P56747 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN6P56747 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN6P56747 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.27□□□□□ -0.29
CLDN6P56747 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN6P56747 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN6P56747 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN6P56747 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.26□□□□□ -0.29
CLDN6P56747 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 FAU-201ENST00000279259 461 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN6P56747 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CLDN6P56747 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CLDN6P56747 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 ACTBP14-201ENST00000411655 1089 ntBASIC13.26□□□□□ -0.29
CLDN6P56747 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CLDN6P56747 AC103563.1-201ENST00000429316 123 ntBASIC13.26□□□□□ -0.29
CLDN6P56747 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
CLDN6P56747 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN6P56747 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN6P56747 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN6P56747 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN6P56747 PES1P2-201ENST00000449745 1735 ntBASIC13.26□□□□□ -0.29
CLDN6P56747 CDK4P1-201ENST00000454213 828 ntBASIC13.26□□□□□ -0.29
CLDN6P56747 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC13.26□□□□□ -0.29
CLDN6P56747 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CLDN6P56747 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC13.26□□□□□ -0.29
CLDN6P56747 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC13.26□□□□□ -0.29
CLDN6P56747 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN6P56747 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms