Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.24■□□□□ 0.03
KRT9P35527 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.24■□□□□ 0.03
KRT9P35527 AC104306.2-201ENST00000451877 341 ntBASIC15.24■□□□□ 0.03
KRT9P35527 PFN1P12-201ENST00000455938 534 ntBASIC15.24■□□□□ 0.03
KRT9P35527 SERPINA13P-202ENST00000478994 924 ntBASIC15.24■□□□□ 0.03
KRT9P35527 SNORD3B-2-202ENST00000571722 791 ntBASIC15.24■□□□□ 0.03
KRT9P35527 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
KRT9P35527 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.24■□□□□ 0.03
KRT9P35527 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT9P35527 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC15.24■□□□□ 0.03
KRT9P35527 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT9P35527 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT9P35527 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT9P35527 AL645937.6-201ENST00000641122 3727 ntBASIC15.24■□□□□ 0.03
KRT9P35527 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
KRT9P35527 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC15.24■□□□□ 0.03
KRT9P35527 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT9P35527 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
KRT9P35527 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT9P35527 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
KRT9P35527 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
KRT9P35527 AC018735.1-201ENST00000437208 1502 ntBASIC15.23■□□□□ 0.03
KRT9P35527 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.23■□□□□ 0.03
KRT9P35527 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.23■□□□□ 0.03
KRT9P35527 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.23■□□□□ 0.03
KRT9P35527 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.23■□□□□ 0.03
KRT9P35527 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
KRT9P35527 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 AL161773.1-201ENST00000624845 863 ntBASIC15.23■□□□□ 0.03
KRT9P35527 AL033527.4-201ENST00000641026 673 ntBASIC15.23■□□□□ 0.03
KRT9P35527 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
KRT9P35527 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
KRT9P35527 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
KRT9P35527 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.23■□□□□ 0.03
KRT9P35527 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
KRT9P35527 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT9P35527 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.23■□□□□ 0.03
KRT9P35527 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
KRT9P35527 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT9P35527 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT9P35527 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
KRT9P35527 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT9P35527 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
KRT9P35527 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
KRT9P35527 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC15.22■□□□□ 0.03
KRT9P35527 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT9P35527 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT9P35527 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT9P35527 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.22■□□□□ 0.03
KRT9P35527 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.22■□□□□ 0.03
KRT9P35527 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.22■□□□□ 0.03
KRT9P35527 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC15.22■□□□□ 0.03
KRT9P35527 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT9P35527 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.22■□□□□ 0.03
KRT9P35527 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT9P35527 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.22■□□□□ 0.03
KRT9P35527 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
KRT9P35527 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
KRT9P35527 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.22■□□□□ 0.03
KRT9P35527 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT9P35527 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT9P35527 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC15.22■□□□□ 0.03
KRT9P35527 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC15.22■□□□□ 0.03
KRT9P35527 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT9P35527 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT9P35527 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT9P35527 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT9P35527 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT9P35527 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT9P35527 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT9P35527 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
KRT9P35527 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT9P35527 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT9P35527 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT9P35527 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
KRT9P35527 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT9P35527 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms