Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CHRNA3P32297 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC14.69□□□□□ -0.06
CHRNA3P32297 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CHRNA3P32297 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.68□□□□□ -0.06
CHRNA3P32297 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.68□□□□□ -0.06
CHRNA3P32297 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CHRNA3P32297 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC14.68□□□□□ -0.06
CHRNA3P32297 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC14.68□□□□□ -0.06
CHRNA3P32297 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.68□□□□□ -0.06
CHRNA3P32297 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CHRNA3P32297 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 AC239868.1-201ENST00000369385 493 ntBASIC14.68□□□□□ -0.06
CHRNA3P32297 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.68□□□□□ -0.06
CHRNA3P32297 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.68□□□□□ -0.06
CHRNA3P32297 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.68□□□□□ -0.06
CHRNA3P32297 RN7SL720P-201ENST00000488178 304 ntBASIC14.68□□□□□ -0.06
CHRNA3P32297 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.68□□□□□ -0.06
CHRNA3P32297 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.68□□□□□ -0.06
CHRNA3P32297 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.68□□□□□ -0.06
CHRNA3P32297 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.68□□□□□ -0.06
CHRNA3P32297 PGAM1P5-201ENST00000548011 764 ntBASIC14.68□□□□□ -0.06
CHRNA3P32297 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.68□□□□□ -0.06
CHRNA3P32297 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CHRNA3P32297 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.68□□□□□ -0.06
CHRNA3P32297 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.68□□□□□ -0.06
CHRNA3P32297 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.68□□□□□ -0.06
CHRNA3P32297 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.68□□□□□ -0.06
CHRNA3P32297 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC14.68□□□□□ -0.06
CHRNA3P32297 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 MARK2P16-201ENST00000605714 1723 ntBASIC14.68□□□□□ -0.06
CHRNA3P32297 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 LINC00638-201ENST00000555578 2518 ntBASIC14.68□□□□□ -0.06
CHRNA3P32297 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CHRNA3P32297 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC14.68□□□□□ -0.06
CHRNA3P32297 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNA3P32297 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 LINC00115-201ENST00000473798 1317 ntBASIC14.67□□□□□ -0.06
CHRNA3P32297 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CHRNA3P32297 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.67□□□□□ -0.06
CHRNA3P32297 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CHRNA3P32297 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.67□□□□□ -0.06
CHRNA3P32297 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC14.67□□□□□ -0.06
CHRNA3P32297 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.67□□□□□ -0.06
CHRNA3P32297 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.67□□□□□ -0.06
CHRNA3P32297 RN7SL769P-201ENST00000469386 295 ntBASIC14.67□□□□□ -0.06
CHRNA3P32297 IMP3P2-201ENST00000489760 475 ntBASIC14.67□□□□□ -0.06
CHRNA3P32297 GOLGA2P8-201ENST00000505201 779 ntBASIC14.67□□□□□ -0.06
CHRNA3P32297 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.67□□□□□ -0.06
CHRNA3P32297 RHOQP1-201ENST00000555758 579 ntBASIC14.67□□□□□ -0.06
CHRNA3P32297 AC104758.3-203ENST00000562938 2123 ntBASIC14.67□□□□□ -0.06
CHRNA3P32297 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.67□□□□□ -0.06
CHRNA3P32297 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.67□□□□□ -0.06
CHRNA3P32297 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.67□□□□□ -0.06
CHRNA3P32297 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CHRNA3P32297 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CHRNA3P32297 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.67□□□□□ -0.06
CHRNA3P32297 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms