Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 AC010335.3-201ENST00000623767 531 ntBASIC14.84□□□□□ -0.03
SYN1P17600 AC091905.3-201ENST00000624959 234 ntBASIC14.84□□□□□ -0.03
SYN1P17600 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SYN1P17600 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.84□□□□□ -0.03
SYN1P17600 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.84□□□□□ -0.03
SYN1P17600 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.84□□□□□ -0.03
SYN1P17600 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYN1P17600 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC14.84□□□□□ -0.03
SYN1P17600 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.84□□□□□ -0.03
SYN1P17600 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYN1P17600 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SYN1P17600 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
SYN1P17600 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYN1P17600 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYN1P17600 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYN1P17600 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYN1P17600 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SYN1P17600 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.83□□□□□ -0.03
SYN1P17600 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.83□□□□□ -0.03
SYN1P17600 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SYN1P17600 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SYN1P17600 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SYN1P17600 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYN1P17600 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYN1P17600 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SYN1P17600 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYN1P17600 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SYN1P17600 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYN1P17600 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.83□□□□□ -0.04
SYN1P17600 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SYN1P17600 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC14.83□□□□□ -0.04
SYN1P17600 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SYN1P17600 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC14.83□□□□□ -0.04
SYN1P17600 FTLP3-201ENST00000427242 528 ntBASIC14.83□□□□□ -0.04
SYN1P17600 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC14.83□□□□□ -0.04
SYN1P17600 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC14.83□□□□□ -0.04
SYN1P17600 PRDX3P2-201ENST00000447051 611 ntBASIC14.83□□□□□ -0.04
SYN1P17600 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYN1P17600 AC105424.1-201ENST00000514583 209 ntBASIC14.83□□□□□ -0.04
SYN1P17600 AC022447.6-201ENST00000515522 438 ntBASIC14.83□□□□□ -0.04
SYN1P17600 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SYN1P17600 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC14.83□□□□□ -0.04
SYN1P17600 MIR4459-201ENST00000581837 66 ntBASIC14.83□□□□□ -0.04
SYN1P17600 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SYN1P17600 AL356740.1-201ENST00000602192 1297 ntBASIC14.83□□□□□ -0.04
SYN1P17600 AC092535.4-201ENST00000609548 397 ntBASIC14.83□□□□□ -0.04
SYN1P17600 AC127002.1-201ENST00000619123 455 ntBASIC14.83□□□□□ -0.04
SYN1P17600 AC073592.10-201ENST00000624789 597 ntBASIC14.83□□□□□ -0.04
SYN1P17600 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYN1P17600 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYN1P17600 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYN1P17600 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC14.83□□□□□ -0.04
SYN1P17600 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SYN1P17600 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.83□□□□□ -0.04
SYN1P17600 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.83□□□□□ -0.04
SYN1P17600 LINC02486-201ENST00000604157 3000 ntBASIC14.83□□□□□ -0.04
SYN1P17600 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYN1P17600 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SYN1P17600 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYN1P17600 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC14.83□□□□□ -0.04
SYN1P17600 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYN1P17600 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYN1P17600 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
SYN1P17600 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
SYN1P17600 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYN1P17600 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14.83□□□□□ -0.04
SYN1P17600 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC14.82□□□□□ -0.04
SYN1P17600 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYN1P17600 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYN1P17600 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SYN1P17600 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SYN1P17600 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYN1P17600 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SYN1P17600 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SYN1P17600 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SYN1P17600 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SYN1P17600 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYN1P17600 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYN1P17600 PCDHA3-202ENST00000532566 4594 ntBASIC14.82□□□□□ -0.04
SYN1P17600 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYN1P17600 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SYN1P17600 NRADDP-202ENST00000641269 1585 ntBASIC14.82□□□□□ -0.04
SYN1P17600 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.82□□□□□ -0.04
SYN1P17600 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYN1P17600 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYN1P17600 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.82□□□□□ -0.04
SYN1P17600 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.82□□□□□ -0.04
SYN1P17600 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SYN1P17600 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.82□□□□□ -0.04
SYN1P17600 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.82□□□□□ -0.04
SYN1P17600 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYN1P17600 RPS6-201ENST00000315377 863 ntTSL 3 BASIC14.82□□□□□ -0.04
SYN1P17600 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SYN1P17600 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC14.82□□□□□ -0.04
SYN1P17600 AL049792.1-201ENST00000424708 1262 ntBASIC14.82□□□□□ -0.04
SYN1P17600 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC14.82□□□□□ -0.04
SYN1P17600 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC14.82□□□□□ -0.04
SYN1P17600 RN7SL487P-201ENST00000468140 344 ntBASIC14.82□□□□□ -0.04
SYN1P17600 RN7SL340P-201ENST00000470792 296 ntBASIC14.82□□□□□ -0.04
SYN1P17600 CXXC1P1-202ENST00000489409 1212 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms