Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC025271.4-201ENST00000621477 1726 ntBASIC12.68□□□□□ -0.38
P04436 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
P04436 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.68□□□□□ -0.38
P04436 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
P04436 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
P04436 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
P04436 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.67□□□□□ -0.38
P04436 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
P04436 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.67□□□□□ -0.38
P04436 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
P04436 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.67□□□□□ -0.38
P04436 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.67□□□□□ -0.38
P04436 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.67□□□□□ -0.38
P04436 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
P04436 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
P04436 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.67□□□□□ -0.38
P04436 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
P04436 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 ACTBP14-201ENST00000411655 1089 ntBASIC12.67□□□□□ -0.38
P04436 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.67□□□□□ -0.38
P04436 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.67□□□□□ -0.38
P04436 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC12.67□□□□□ -0.38
P04436 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.67□□□□□ -0.38
P04436 EEF1GP8-201ENST00000506566 1154 ntBASIC12.67□□□□□ -0.38
P04436 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.67□□□□□ -0.38
P04436 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.67□□□□□ -0.38
P04436 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
P04436 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC12.67□□□□□ -0.38
P04436 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.67□□□□□ -0.38
P04436 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.67□□□□□ -0.38
P04436 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 AC021305.1-201ENST00000520656 1514 ntBASIC12.67□□□□□ -0.38
P04436 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC12.67□□□□□ -0.38
P04436 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.67□□□□□ -0.38
P04436 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
P04436 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
P04436 AC073957.3-201ENST00000609998 6758 ntBASIC12.67□□□□□ -0.38
P04436 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
P04436 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04436 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04436 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
P04436 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04436 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04436 CTBP2P8-201ENST00000422584 1330 ntBASIC12.66□□□□□ -0.38
P04436 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
P04436 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.66□□□□□ -0.38
P04436 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
P04436 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04436 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.66□□□□□ -0.38
P04436 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04436 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.66□□□□□ -0.38
P04436 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.66□□□□□ -0.38
P04436 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
P04436 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.66□□□□□ -0.38
P04436 AC117503.4-201ENST00000623229 1418 ntBASIC12.66□□□□□ -0.38
P04436 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04436 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
P04436 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04436 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
P04436 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
P04436 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC12.66□□□□□ -0.38
P04436 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC12.66□□□□□ -0.38
P04436 AC073210.1-201ENST00000414799 232 ntBASIC12.66□□□□□ -0.38
P04436 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC12.66□□□□□ -0.38
P04436 AC025186.1-201ENST00000478174 870 ntBASIC12.66□□□□□ -0.38
P04436 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
P04436 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
P04436 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC12.66□□□□□ -0.38
P04436 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms