Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.77□□□□□ -0.36
NKX2-2O95096 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-2O95096 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-2O95096 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.77□□□□□ -0.36
NKX2-2O95096 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-2O95096 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
NKX2-2O95096 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-2O95096 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-2O95096 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-2O95096 AC019294.4-201ENST00000561777 2905 ntBASIC12.77□□□□□ -0.36
NKX2-2O95096 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.77□□□□□ -0.36
NKX2-2O95096 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-2O95096 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-2O95096 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
NKX2-2O95096 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
NKX2-2O95096 AC002350.2-201ENST00000623894 1828 ntBASIC12.77□□□□□ -0.37
NKX2-2O95096 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
NKX2-2O95096 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
NKX2-2O95096 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-2O95096 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-2O95096 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.77□□□□□ -0.37
NKX2-2O95096 ORAOV1P1-201ENST00000503108 395 ntBASIC12.77□□□□□ -0.37
NKX2-2O95096 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.77□□□□□ -0.37
NKX2-2O95096 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.77□□□□□ -0.37
NKX2-2O95096 SNORD3B-1-201ENST00000577988 758 ntBASIC12.77□□□□□ -0.37
NKX2-2O95096 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.77□□□□□ -0.37
NKX2-2O95096 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC12.77□□□□□ -0.37
NKX2-2O95096 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.77□□□□□ -0.37
NKX2-2O95096 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-2O95096 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.77□□□□□ -0.37
NKX2-2O95096 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-2O95096 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.77□□□□□ -0.37
NKX2-2O95096 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
NKX2-2O95096 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.77□□□□□ -0.37
NKX2-2O95096 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-2O95096 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.77□□□□□ -0.37
NKX2-2O95096 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-2O95096 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-2O95096 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-2O95096 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-2O95096 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-2O95096 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
NKX2-2O95096 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-2O95096 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.77□□□□□ -0.37
NKX2-2O95096 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
NKX2-2O95096 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
NKX2-2O95096 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-2O95096 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
NKX2-2O95096 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX2-2O95096 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX2-2O95096 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC12.76□□□□□ -0.37
NKX2-2O95096 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX2-2O95096 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-2O95096 AC005077.3-201ENST00000449614 213 ntBASIC12.76□□□□□ -0.37
NKX2-2O95096 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-2O95096 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 IMP3P2-201ENST00000489760 475 ntBASIC12.76□□□□□ -0.37
NKX2-2O95096 RN7SL564P-201ENST00000496309 250 ntBASIC12.76□□□□□ -0.37
NKX2-2O95096 AC134698.3-201ENST00000523880 214 ntBASIC12.76□□□□□ -0.37
NKX2-2O95096 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
NKX2-2O95096 OR5BD1P-201ENST00000532527 817 ntBASIC12.76□□□□□ -0.37
NKX2-2O95096 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.76□□□□□ -0.37
NKX2-2O95096 KRT8P2-201ENST00000556193 944 ntBASIC12.76□□□□□ -0.37
NKX2-2O95096 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX2-2O95096 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-2O95096 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
NKX2-2O95096 AC051619.9-201ENST00000623237 597 ntBASIC12.76□□□□□ -0.37
NKX2-2O95096 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.76□□□□□ -0.37
NKX2-2O95096 PTENP1-202ENST00000532280 3996 ntBASIC12.76□□□□□ -0.37
NKX2-2O95096 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX2-2O95096 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-2O95096 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
NKX2-2O95096 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 AC024075.2-201ENST00000598112 1473 ntBASIC12.76□□□□□ -0.37
NKX2-2O95096 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-2O95096 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-2O95096 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms