Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 KRT223P-202ENST00000449164 1292 ntBASIC11.89□□□□□ -0.51
SDCBPO00560 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC11.89□□□□□ -0.51
SDCBPO00560 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SDCBPO00560 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC11.89□□□□□ -0.51
SDCBPO00560 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC11.89□□□□□ -0.51
SDCBPO00560 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC11.89□□□□□ -0.51
SDCBPO00560 DUX4L45-201ENST00000566406 1057 ntBASIC11.89□□□□□ -0.51
SDCBPO00560 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC11.89□□□□□ -0.51
SDCBPO00560 AC124068.2-201ENST00000569473 1109 ntBASIC11.89□□□□□ -0.51
SDCBPO00560 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SDCBPO00560 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC11.89□□□□□ -0.51
SDCBPO00560 AC017083.2-201ENST00000608069 979 ntBASIC11.89□□□□□ -0.51
SDCBPO00560 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
SDCBPO00560 RPL35-206ENST00000629845 340 ntTSL 5 BASIC11.89□□□□□ -0.51
SDCBPO00560 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC11.89□□□□□ -0.51
SDCBPO00560 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SDCBPO00560 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
SDCBPO00560 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.89□□□□□ -0.51
SDCBPO00560 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC11.89□□□□□ -0.51
SDCBPO00560 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC11.89□□□□□ -0.51
SDCBPO00560 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.89□□□□□ -0.51
SDCBPO00560 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC11.89□□□□□ -0.51
SDCBPO00560 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SDCBPO00560 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SDCBPO00560 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SDCBPO00560 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SDCBPO00560 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC11.89□□□□□ -0.51
SDCBPO00560 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SDCBPO00560 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
SDCBPO00560 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SDCBPO00560 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC11.89□□□□□ -0.51
SDCBPO00560 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
SDCBPO00560 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SDCBPO00560 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SDCBPO00560 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 AL590824.1-201ENST00000403828 1349 ntBASIC11.88□□□□□ -0.51
SDCBPO00560 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SDCBPO00560 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
SDCBPO00560 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
SDCBPO00560 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC11.88□□□□□ -0.51
SDCBPO00560 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC11.88□□□□□ -0.51
SDCBPO00560 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 KLF2P1-201ENST00000447438 1042 ntBASIC11.88□□□□□ -0.51
SDCBPO00560 AC021723.1-201ENST00000486306 515 ntBASIC11.88□□□□□ -0.51
SDCBPO00560 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 ACR-203ENST00000529621 708 ntTSL 5 BASIC11.88□□□□□ -0.51
SDCBPO00560 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 AL162426.1-201ENST00000624141 743 ntBASIC11.88□□□□□ -0.51
SDCBPO00560 Z98259.2-201ENST00000641583 609 ntBASIC11.88□□□□□ -0.51
SDCBPO00560 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
SDCBPO00560 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC11.88□□□□□ -0.51
SDCBPO00560 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SDCBPO00560 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC11.88□□□□□ -0.51
SDCBPO00560 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SDCBPO00560 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
SDCBPO00560 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC11.88□□□□□ -0.51
SDCBPO00560 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC11.88□□□□□ -0.51
SDCBPO00560 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SDCBPO00560 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SDCBPO00560 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SDCBPO00560 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SDCBPO00560 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SDCBPO00560 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
SDCBPO00560 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SDCBPO00560 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SDCBPO00560 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SDCBPO00560 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SDCBPO00560 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.87□□□□□ -0.51
SDCBPO00560 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SDCBPO00560 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC11.87□□□□□ -0.51
SDCBPO00560 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SDCBPO00560 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SDCBPO00560 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
SDCBPO00560 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
SDCBPO00560 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC11.87□□□□□ -0.51
SDCBPO00560 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC11.87□□□□□ -0.51
SDCBPO00560 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms