Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
UPK2O00526 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
UPK2O00526 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC11.17□□□□□ -0.62
UPK2O00526 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 KRTAP10-13P-201ENST00000412914 571 ntBASIC11.17□□□□□ -0.62
UPK2O00526 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 ALG1L13P-202ENST00000519320 584 ntBASIC11.17□□□□□ -0.62
UPK2O00526 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC11.17□□□□□ -0.62
UPK2O00526 AC126915.1-201ENST00000522847 1038 ntBASIC11.17□□□□□ -0.62
UPK2O00526 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC11.17□□□□□ -0.62
UPK2O00526 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC11.17□□□□□ -0.62
UPK2O00526 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC11.17□□□□□ -0.62
UPK2O00526 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC11.17□□□□□ -0.62
UPK2O00526 ELP5-212ENST00000574255 671 ntTSL 2 BASIC11.17□□□□□ -0.62
UPK2O00526 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC11.17□□□□□ -0.62
UPK2O00526 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 AL021707.6-201ENST00000609212 491 ntBASIC11.17□□□□□ -0.62
UPK2O00526 PRKN-211ENST00000615065 261 ntTSL 5 BASIC11.17□□□□□ -0.62
UPK2O00526 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC11.17□□□□□ -0.62
UPK2O00526 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 KRT8P43-201ENST00000406052 1458 ntBASIC11.17□□□□□ -0.62
UPK2O00526 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC11.17□□□□□ -0.62
UPK2O00526 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC11.17□□□□□ -0.62
UPK2O00526 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 AC060814.4-201ENST00000594169 2163 ntBASIC11.17□□□□□ -0.62
UPK2O00526 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.17□□□□□ -0.62
UPK2O00526 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
UPK2O00526 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.17□□□□□ -0.62
UPK2O00526 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC11.17□□□□□ -0.62
UPK2O00526 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC11.17□□□□□ -0.62
UPK2O00526 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC11.17□□□□□ -0.62
UPK2O00526 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC11.16□□□□□ -0.62
UPK2O00526 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
UPK2O00526 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC11.16□□□□□ -0.62
UPK2O00526 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC11.16□□□□□ -0.62
UPK2O00526 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.16□□□□□ -0.62
UPK2O00526 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC11.16□□□□□ -0.62
UPK2O00526 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
UPK2O00526 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
UPK2O00526 AC018735.1-201ENST00000437208 1502 ntBASIC11.16□□□□□ -0.62
UPK2O00526 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 AC245140.2-201ENST00000624054 1939 ntBASIC11.16□□□□□ -0.62
UPK2O00526 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 RPS3-201ENST00000278572 907 ntTSL 3 BASIC11.16□□□□□ -0.62
UPK2O00526 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC11.16□□□□□ -0.62
UPK2O00526 NCR3-202ENST00000376071 541 ntTSL 5 BASIC11.16□□□□□ -0.62
UPK2O00526 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC11.16□□□□□ -0.62
UPK2O00526 AC007279.1-201ENST00000448547 837 ntBASIC11.16□□□□□ -0.62
UPK2O00526 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC11.16□□□□□ -0.62
UPK2O00526 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC11.16□□□□□ -0.62
UPK2O00526 SYT17-208ENST00000568433 812 ntTSL 3 BASIC11.16□□□□□ -0.62
UPK2O00526 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
UPK2O00526 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
UPK2O00526 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC11.16□□□□□ -0.62
UPK2O00526 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC11.16□□□□□ -0.62
UPK2O00526 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
UPK2O00526 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
UPK2O00526 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 NRADDP-202ENST00000641269 1585 ntBASIC11.16□□□□□ -0.62
UPK2O00526 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK2O00526 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms