Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.82□□□□□ -0.04
O00370 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.82□□□□□ -0.04
O00370 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.82□□□□□ -0.04
O00370 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
O00370 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 AC118758.2-201ENST00000614242 2813 ntBASIC14.82□□□□□ -0.04
O00370 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.82□□□□□ -0.04
O00370 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.82□□□□□ -0.04
O00370 KRT8P19-201ENST00000551916 1455 ntBASIC14.82□□□□□ -0.04
O00370 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.82□□□□□ -0.04
O00370 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.82□□□□□ -0.04
O00370 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.81□□□□□ -0.04
O00370 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.81□□□□□ -0.04
O00370 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 ABCD1P2-201ENST00000429313 1601 ntBASIC14.81□□□□□ -0.04
O00370 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
O00370 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
O00370 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.81□□□□□ -0.04
O00370 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC14.81□□□□□ -0.04
O00370 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
O00370 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.81□□□□□ -0.04
O00370 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.81□□□□□ -0.04
O00370 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.81□□□□□ -0.04
O00370 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
O00370 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.81□□□□□ -0.04
O00370 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.81□□□□□ -0.04
O00370 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.81□□□□□ -0.04
O00370 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.81□□□□□ -0.04
O00370 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.81□□□□□ -0.04
O00370 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.81□□□□□ -0.04
O00370 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.81□□□□□ -0.04
O00370 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.81□□□□□ -0.04
O00370 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.81□□□□□ -0.04
O00370 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.81□□□□□ -0.04
O00370 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
O00370 AC145285.5-201ENST00000562217 361 ntBASIC14.81□□□□□ -0.04
O00370 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.81□□□□□ -0.04
O00370 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.81□□□□□ -0.04
O00370 AC132825.4-202ENST00000578792 434 ntBASIC14.81□□□□□ -0.04
O00370 MIR4265-201ENST00000582152 99 ntBASIC14.81□□□□□ -0.04
O00370 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
O00370 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.81□□□□□ -0.04
O00370 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.81□□□□□ -0.04
O00370 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC14.81□□□□□ -0.04
O00370 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
O00370 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
O00370 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
O00370 DMBT1P1-203ENST00000636837 4628 ntBASIC14.8□□□□□ -0.04
O00370 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
O00370 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
O00370 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.8□□□□□ -0.04
O00370 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
O00370 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
O00370 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
O00370 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
O00370 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
O00370 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
O00370 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
O00370 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
O00370 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.8□□□□□ -0.04
O00370 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.8□□□□□ -0.04
O00370 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.8□□□□□ -0.04
O00370 AL592076.1-201ENST00000424448 303 ntBASIC14.8□□□□□ -0.04
O00370 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
O00370 AL512306.1-201ENST00000432698 848 ntBASIC14.8□□□□□ -0.04
O00370 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.8□□□□□ -0.04
O00370 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.8□□□□□ -0.04
O00370 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.8□□□□□ -0.04
O00370 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms