Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 Z98885.3-201ENST00000624882 1757 ntBASIC12.46□□□□□ -0.41
COPS3Q9UNS2 AL358781.1-202ENST00000321081 1360 ntBASIC12.46□□□□□ -0.41
COPS3Q9UNS2 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 XBP1P1-201ENST00000436573 652 ntBASIC12.46□□□□□ -0.41
COPS3Q9UNS2 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 MIR4741-201ENST00000579822 90 ntBASIC12.46□□□□□ -0.41
COPS3Q9UNS2 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
COPS3Q9UNS2 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
COPS3Q9UNS2 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
COPS3Q9UNS2 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
COPS3Q9UNS2 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
COPS3Q9UNS2 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
COPS3Q9UNS2 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.46□□□□□ -0.42
COPS3Q9UNS2 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.46□□□□□ -0.42
COPS3Q9UNS2 AC002350.2-201ENST00000623894 1828 ntBASIC12.46□□□□□ -0.42
COPS3Q9UNS2 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
COPS3Q9UNS2 RPL13AP3-202ENST00000494676 1473 ntBASIC12.46□□□□□ -0.42
COPS3Q9UNS2 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
COPS3Q9UNS2 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.46□□□□□ -0.42
COPS3Q9UNS2 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
COPS3Q9UNS2 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
COPS3Q9UNS2 AC145098.2-201ENST00000623593 3026 ntBASIC12.46□□□□□ -0.42
COPS3Q9UNS2 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.45□□□□□ -0.42
COPS3Q9UNS2 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 POM121L10P-201ENST00000436994 1285 ntBASIC12.45□□□□□ -0.42
COPS3Q9UNS2 VDAC1P1-201ENST00000439229 848 ntBASIC12.45□□□□□ -0.42
COPS3Q9UNS2 CTBP2P5-201ENST00000454986 1264 ntBASIC12.45□□□□□ -0.42
COPS3Q9UNS2 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms