Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 LINC01230-201ENST00000625222 3017 ntBASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 RNA5SP491-201ENST00000362936 118 ntBASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 HLA-DMA-202ENST00000395303 1007 ntBASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 HNRNPA1P58-201ENST00000403629 610 ntBASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 HNRNPA1P16-201ENST00000575692 955 ntBASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 FAM187B2P-201ENST00000577135 713 ntBASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 RN7SL121P-201ENST00000584223 273 ntBASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 AC040160.2-201ENST00000623816 1675 ntBASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 AC063926.3-201ENST00000624734 5658 ntBASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 ZNF877P-201ENST00000437614 612 ntBASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 VDAC1P11-201ENST00000458323 852 ntBASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 MME-218ENST00000625667 363 ntTSL 5 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DNMT3BQ9UBC3 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
DNMT3BQ9UBC3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
DNMT3BQ9UBC3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DNMT3BQ9UBC3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.33□□□□□ -0.11
DNMT3BQ9UBC3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
DNMT3BQ9UBC3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
DNMT3BQ9UBC3 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms