Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
ALMS1Q8TCU4 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ALMS1Q8TCU4 RPL15-202ENST00000354811 820 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ALMS1Q8TCU4 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ALMS1Q8TCU4 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
ALMS1Q8TCU4 AC022784.6-203ENST00000520255 863 ntTSL 3 BASIC8.91□□□□□ -0.98
ALMS1Q8TCU4 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC8.91□□□□□ -0.98
ALMS1Q8TCU4 AC126471.1-201ENST00000550676 362 ntBASIC8.91□□□□□ -0.98
ALMS1Q8TCU4 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC8.91□□□□□ -0.98
ALMS1Q8TCU4 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC8.91□□□□□ -0.98
ALMS1Q8TCU4 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
ALMS1Q8TCU4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 MIR324-201ENST00000362183 83 ntBASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 AC087163.1-201ENST00000430089 381 ntBASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 AC022483.2-201ENST00000461464 555 ntBASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 HFE-204ENST00000349999 1704 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 ZNF451-205ENST00000370710 375 ntTSL 2 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 AKR1C5P-201ENST00000427165 609 ntBASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 UCMA-202ENST00000463405 763 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 DHRS4L1-201ENST00000558293 855 ntTSL 5 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 AC005154.1-204ENST00000580902 926 ntTSL 4 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 AC012313.9-201ENST00000619318 633 ntBASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 AC021683.4-201ENST00000623348 1099 ntBASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 SLC26A5-211ENST00000432958 2588 ntTSL 5 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ALMS1Q8TCU4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.99
ALMS1Q8TCU4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC8.9□□□□□ -0.99
ALMS1Q8TCU4 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC8.9□□□□□ -0.99
ALMS1Q8TCU4 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
ALMS1Q8TCU4 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
ALMS1Q8TCU4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
ALMS1Q8TCU4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
ALMS1Q8TCU4 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
ALMS1Q8TCU4 AL391987.4-201ENST00000377547 439 ntTSL 3 BASIC8.9□□□□□ -0.99
ALMS1Q8TCU4 AC006987.4-201ENST00000430032 279 ntBASIC8.9□□□□□ -0.99
ALMS1Q8TCU4 DHRS7-202ENST00000536410 1194 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
ALMS1Q8TCU4 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC8.9□□□□□ -0.99
ALMS1Q8TCU4 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC8.9□□□□□ -0.99
ALMS1Q8TCU4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.99
ALMS1Q8TCU4 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
ALMS1Q8TCU4 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.99
ALMS1Q8TCU4 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AL137784.3-201ENST00000623858 2288 ntBASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AP000897.1-201ENST00000584036 1613 ntBASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 CABYR-203ENST00000399496 1414 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 HTR3D-202ENST00000382489 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 TCTE1-201ENST00000371504 616 ntTSL 3 BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 ART2P-201ENST00000415521 822 ntBASIC8.89□□□□□ -0.99
ALMS1Q8TCU4 TSEN15P3-201ENST00000422363 367 ntBASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms