Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LRRC28Q86X40 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
LRRC28Q86X40 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
LRRC28Q86X40 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
LRRC28Q86X40 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LRRC28Q86X40 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LRRC28Q86X40 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
LRRC28Q86X40 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LRRC28Q86X40 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
LRRC28Q86X40 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
LRRC28Q86X40 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LRRC28Q86X40 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.46□□□□□ -0.42
LRRC28Q86X40 CSPG4P11-201ENST00000560634 4910 ntBASIC12.45□□□□□ -0.42
LRRC28Q86X40 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.45□□□□□ -0.42
LRRC28Q86X40 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
LRRC28Q86X40 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 KRT8P28-201ENST00000433288 1390 ntBASIC12.45□□□□□ -0.42
LRRC28Q86X40 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.45□□□□□ -0.42
LRRC28Q86X40 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
LRRC28Q86X40 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 AC102953.2-201ENST00000609755 3026 ntBASIC12.45□□□□□ -0.42
LRRC28Q86X40 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.45□□□□□ -0.42
LRRC28Q86X40 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.45□□□□□ -0.42
LRRC28Q86X40 POM121L10P-201ENST00000436994 1285 ntBASIC12.45□□□□□ -0.42
LRRC28Q86X40 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.45□□□□□ -0.42
LRRC28Q86X40 AC104306.2-201ENST00000451877 341 ntBASIC12.45□□□□□ -0.42
LRRC28Q86X40 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.45□□□□□ -0.42
LRRC28Q86X40 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.45□□□□□ -0.42
LRRC28Q86X40 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.45□□□□□ -0.42
LRRC28Q86X40 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.45□□□□□ -0.42
LRRC28Q86X40 MIR4525-201ENST00000580000 75 ntBASIC12.45□□□□□ -0.42
LRRC28Q86X40 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.45□□□□□ -0.42
LRRC28Q86X40 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
LRRC28Q86X40 AL096828.3-201ENST00000615354 462 ntBASIC12.45□□□□□ -0.42
LRRC28Q86X40 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 AC009093.2-202ENST00000620513 2079 ntBASIC12.45□□□□□ -0.42
LRRC28Q86X40 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.45□□□□□ -0.42
LRRC28Q86X40 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.45□□□□□ -0.42
LRRC28Q86X40 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.45□□□□□ -0.42
LRRC28Q86X40 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
LRRC28Q86X40 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.45□□□□□ -0.42
LRRC28Q86X40 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.45□□□□□ -0.42
LRRC28Q86X40 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LRRC28Q86X40 AC022364.1-202ENST00000617468 2409 ntBASIC12.45□□□□□ -0.42
LRRC28Q86X40 AL358781.1-202ENST00000321081 1360 ntBASIC12.44□□□□□ -0.42
LRRC28Q86X40 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 AL354877.1-201ENST00000424412 413 ntBASIC12.44□□□□□ -0.42
LRRC28Q86X40 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms