Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 AC093462.1-201ENST00000621167 1683 ntBASIC13.24□□□□□ -0.29
SKP1P63208 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.24□□□□□ -0.29
SKP1P63208 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.24□□□□□ -0.29
SKP1P63208 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SKP1P63208 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
SKP1P63208 AC010327.5-201ENST00000586923 3061 ntBASIC13.24□□□□□ -0.29
SKP1P63208 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
SKP1P63208 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SKP1P63208 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SKP1P63208 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.23□□□□□ -0.29
SKP1P63208 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SKP1P63208 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.23□□□□□ -0.29
SKP1P63208 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 HLA-DMA-203ENST00000395305 777 ntBASIC13.23□□□□□ -0.29
SKP1P63208 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.23□□□□□ -0.29
SKP1P63208 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.23□□□□□ -0.29
SKP1P63208 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC13.23□□□□□ -0.29
SKP1P63208 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.23□□□□□ -0.29
SKP1P63208 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
SKP1P63208 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.23□□□□□ -0.29
SKP1P63208 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SKP1P63208 RHOQP1-201ENST00000555758 579 ntBASIC13.23□□□□□ -0.29
SKP1P63208 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.23□□□□□ -0.29
SKP1P63208 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.23□□□□□ -0.29
SKP1P63208 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.23□□□□□ -0.29
SKP1P63208 NUDT4P2-201ENST00000578341 546 ntBASIC13.23□□□□□ -0.29
SKP1P63208 GAS7-216ENST00000583882 553 ntTSL 5 BASIC13.23□□□□□ -0.29
SKP1P63208 AL356740.1-201ENST00000602192 1297 ntBASIC13.23□□□□□ -0.29
SKP1P63208 AC009145.4-201ENST00000625119 1294 ntBASIC13.23□□□□□ -0.29
SKP1P63208 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SKP1P63208 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.23□□□□□ -0.29
SKP1P63208 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SKP1P63208 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SKP1P63208 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SKP1P63208 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SKP1P63208 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SKP1P63208 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SKP1P63208 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
SKP1P63208 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SKP1P63208 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SKP1P63208 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SKP1P63208 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SKP1P63208 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SKP1P63208 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13.22□□□□□ -0.29
SKP1P63208 FMO6P-201ENST00000236166 1620 ntBASIC13.22□□□□□ -0.29
SKP1P63208 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SKP1P63208 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SKP1P63208 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.22□□□□□ -0.29
SKP1P63208 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SKP1P63208 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SKP1P63208 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SKP1P63208 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SKP1P63208 AL391647.1-201ENST00000395664 511 ntBASIC13.22□□□□□ -0.29
SKP1P63208 DKKL1P1-201ENST00000400550 698 ntBASIC13.22□□□□□ -0.29
SKP1P63208 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SKP1P63208 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SKP1P63208 GUSBP10-201ENST00000417412 665 ntBASIC13.22□□□□□ -0.29
SKP1P63208 AC092573.1-201ENST00000433054 884 ntBASIC13.22□□□□□ -0.29
SKP1P63208 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.22□□□□□ -0.29
SKP1P63208 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SKP1P63208 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms