Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
GFRA1P56159 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
GFRA1P56159 LINP1-201ENST00000417112 917 ntTSL 2 BASIC12.39□□□□□ -0.43
GFRA1P56159 AC108734.2-201ENST00000420887 1069 ntBASIC12.39□□□□□ -0.43
GFRA1P56159 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.39□□□□□ -0.43
GFRA1P56159 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC12.39□□□□□ -0.43
GFRA1P56159 AC079250.1-201ENST00000456046 531 ntBASIC12.39□□□□□ -0.43
GFRA1P56159 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 RPS23-207ENST00000511844 530 ntTSL 2 BASIC12.39□□□□□ -0.43
GFRA1P56159 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC12.39□□□□□ -0.43
GFRA1P56159 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.39□□□□□ -0.43
GFRA1P56159 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 CES1P2-201ENST00000566467 1242 ntBASIC12.39□□□□□ -0.43
GFRA1P56159 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC12.39□□□□□ -0.43
GFRA1P56159 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.39□□□□□ -0.43
GFRA1P56159 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
GFRA1P56159 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.39□□□□□ -0.43
GFRA1P56159 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 ABCD1P2-201ENST00000429313 1601 ntBASIC12.39□□□□□ -0.43
GFRA1P56159 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.39□□□□□ -0.43
GFRA1P56159 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
GFRA1P56159 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.39□□□□□ -0.43
GFRA1P56159 AC025271.4-201ENST00000621477 1726 ntBASIC12.39□□□□□ -0.43
GFRA1P56159 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.39□□□□□ -0.43
GFRA1P56159 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.39□□□□□ -0.43
GFRA1P56159 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 CR383656.2-201ENST00000548656 2254 ntBASIC12.39□□□□□ -0.43
GFRA1P56159 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.38□□□□□ -0.43
GFRA1P56159 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC12.38□□□□□ -0.43
GFRA1P56159 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.38□□□□□ -0.43
GFRA1P56159 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC12.38□□□□□ -0.43
GFRA1P56159 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC12.38□□□□□ -0.43
GFRA1P56159 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC12.38□□□□□ -0.43
GFRA1P56159 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC12.38□□□□□ -0.43
GFRA1P56159 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC12.38□□□□□ -0.43
GFRA1P56159 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC12.38□□□□□ -0.43
GFRA1P56159 AC005077.3-201ENST00000449614 213 ntBASIC12.38□□□□□ -0.43
GFRA1P56159 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC12.38□□□□□ -0.43
GFRA1P56159 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC12.38□□□□□ -0.43
GFRA1P56159 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.38□□□□□ -0.43
GFRA1P56159 FOXN3-AS2-201ENST00000554071 1262 ntBASIC12.38□□□□□ -0.43
GFRA1P56159 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC12.38□□□□□ -0.43
GFRA1P56159 AC013553.1-201ENST00000560906 267 ntBASIC12.38□□□□□ -0.43
GFRA1P56159 MT2A-202ENST00000561491 581 ntTSL 2 BASIC12.38□□□□□ -0.43
GFRA1P56159 MT3-202ENST00000561640 514 ntTSL 3 BASIC12.38□□□□□ -0.43
GFRA1P56159 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.38□□□□□ -0.43
GFRA1P56159 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC12.38□□□□□ -0.43
GFRA1P56159 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC12.38□□□□□ -0.43
GFRA1P56159 MIR6727-201ENST00000620702 65 ntBASIC12.38□□□□□ -0.43
GFRA1P56159 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
GFRA1P56159 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
GFRA1P56159 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
GFRA1P56159 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.38□□□□□ -0.43
GFRA1P56159 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.38□□□□□ -0.43
GFRA1P56159 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.38□□□□□ -0.43
GFRA1P56159 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
GFRA1P56159 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.38□□□□□ -0.43
GFRA1P56159 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.38□□□□□ -0.43
GFRA1P56159 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.38□□□□□ -0.43
GFRA1P56159 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
GFRA1P56159 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
GFRA1P56159 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GFRA1P56159 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.38□□□□□ -0.43
GFRA1P56159 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
GFRA1P56159 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms