Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.55□□□□□ -0.08
SLC1A1P43005 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC1A1P43005 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SLC1A1P43005 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC1A1P43005 AL805961.1-203ENST00000641078 1258 ntBASIC14.55□□□□□ -0.08
SLC1A1P43005 AGGF1P10-201ENST00000635005 2191 ntBASIC14.55□□□□□ -0.08
SLC1A1P43005 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SLC1A1P43005 STX3-207ENST00000633708 3111 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC1A1P43005 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC1A1P43005 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC1A1P43005 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SLC1A1P43005 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC1A1P43005 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC1A1P43005 LINC00567-201ENST00000569854 3409 ntBASIC14.54□□□□□ -0.08
SLC1A1P43005 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SLC1A1P43005 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A1P43005 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A1P43005 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
SLC1A1P43005 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SLC1A1P43005 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SLC1A1P43005 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A1P43005 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A1P43005 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A1P43005 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC1A1P43005 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A1P43005 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SLC1A1P43005 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.54□□□□□ -0.08
SLC1A1P43005 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SLC1A1P43005 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A1P43005 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC1A1P43005 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SLC1A1P43005 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SLC1A1P43005 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SLC1A1P43005 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A1P43005 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC1A1P43005 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
SLC1A1P43005 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A1P43005 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A1P43005 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC1A1P43005 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC1A1P43005 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A1P43005 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC1A1P43005 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC1A1P43005 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC1A1P43005 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC1A1P43005 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A1P43005 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC1A1P43005 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SLC1A1P43005 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A1P43005 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SLC1A1P43005 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A1P43005 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A1P43005 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A1P43005 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SLC1A1P43005 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC1A1P43005 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 AC015909.3-201ENST00000572855 1794 ntBASIC14.53□□□□□ -0.08
SLC1A1P43005 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC1A1P43005 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SLC1A1P43005 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.53□□□□□ -0.08
SLC1A1P43005 CYP46A4P-201ENST00000414953 267 ntBASIC14.53□□□□□ -0.08
SLC1A1P43005 PFN1P12-201ENST00000455938 534 ntBASIC14.53□□□□□ -0.08
SLC1A1P43005 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.53□□□□□ -0.08
SLC1A1P43005 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.53□□□□□ -0.08
SLC1A1P43005 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC1A1P43005 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC1A1P43005 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.53□□□□□ -0.08
SLC1A1P43005 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.53□□□□□ -0.08
SLC1A1P43005 AC138649.2-201ENST00000615886 705 ntBASIC14.53□□□□□ -0.08
SLC1A1P43005 AC100757.4-201ENST00000626934 759 ntBASIC14.53□□□□□ -0.08
SLC1A1P43005 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.53□□□□□ -0.08
SLC1A1P43005 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC1A1P43005 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.53□□□□□ -0.08
SLC1A1P43005 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC1A1P43005 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms