Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.86□□□□□ -0.35
THBS1P07996 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.86□□□□□ -0.35
THBS1P07996 AL645939.5-201ENST00000606834 243 ntBASIC12.86□□□□□ -0.35
THBS1P07996 AL021707.6-201ENST00000609212 491 ntBASIC12.86□□□□□ -0.35
THBS1P07996 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
THBS1P07996 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
THBS1P07996 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.86□□□□□ -0.35
THBS1P07996 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
THBS1P07996 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
THBS1P07996 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.86□□□□□ -0.35
THBS1P07996 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
THBS1P07996 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
THBS1P07996 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
THBS1P07996 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 AC019294.4-201ENST00000561777 2905 ntBASIC12.85□□□□□ -0.35
THBS1P07996 AC099521.3-201ENST00000624251 2938 ntBASIC12.85□□□□□ -0.35
THBS1P07996 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.85□□□□□ -0.35
THBS1P07996 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.85□□□□□ -0.35
THBS1P07996 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
THBS1P07996 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.85□□□□□ -0.35
THBS1P07996 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.85□□□□□ -0.35
THBS1P07996 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 AC020763.3-201ENST00000625095 2904 ntBASIC12.85□□□□□ -0.35
THBS1P07996 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 KRT17P5-201ENST00000332088 839 ntBASIC12.85□□□□□ -0.35
THBS1P07996 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC12.85□□□□□ -0.35
THBS1P07996 ELK2AP-201ENST00000392510 1007 ntBASIC12.85□□□□□ -0.35
THBS1P07996 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.85□□□□□ -0.35
THBS1P07996 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC12.85□□□□□ -0.35
THBS1P07996 AL008707.1-201ENST00000422498 534 ntBASIC12.85□□□□□ -0.35
THBS1P07996 PPP1R2P4-201ENST00000424051 595 ntBASIC12.85□□□□□ -0.35
THBS1P07996 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.85□□□□□ -0.35
THBS1P07996 FNTAP2-201ENST00000430308 634 ntBASIC12.85□□□□□ -0.35
THBS1P07996 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.85□□□□□ -0.35
THBS1P07996 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.85□□□□□ -0.35
THBS1P07996 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.85□□□□□ -0.35
THBS1P07996 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.85□□□□□ -0.35
THBS1P07996 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.85□□□□□ -0.35
THBS1P07996 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 HMGB1P8-201ENST00000558211 949 ntBASIC12.85□□□□□ -0.35
THBS1P07996 MIR3940-201ENST00000579148 102 ntBASIC12.85□□□□□ -0.35
THBS1P07996 AL451050.2-201ENST00000606967 682 ntBASIC12.85□□□□□ -0.35
THBS1P07996 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.85□□□□□ -0.35
THBS1P07996 AL109620.1-201ENST00000618738 1197 ntBASIC12.85□□□□□ -0.35
THBS1P07996 DGCR9-201ENST00000609630 2415 ntBASIC12.85□□□□□ -0.35
THBS1P07996 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.85□□□□□ -0.35
THBS1P07996 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 NRADDP-202ENST00000641269 1585 ntBASIC12.85□□□□□ -0.35
THBS1P07996 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
THBS1P07996 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
THBS1P07996 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.85□□□□□ -0.35
THBS1P07996 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
THBS1P07996 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
THBS1P07996 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
THBS1P07996 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
THBS1P07996 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
THBS1P07996 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
THBS1P07996 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.84□□□□□ -0.35
THBS1P07996 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.84□□□□□ -0.35
THBS1P07996 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.84□□□□□ -0.35
THBS1P07996 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
THBS1P07996 AC245140.2-201ENST00000624054 1939 ntBASIC12.84□□□□□ -0.35
THBS1P07996 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.84□□□□□ -0.35
THBS1P07996 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
THBS1P07996 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
THBS1P07996 AL157791.1-201ENST00000553667 1699 ntBASIC12.84□□□□□ -0.35
THBS1P07996 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.84□□□□□ -0.35
THBS1P07996 AC026271.4-201ENST00000578214 1833 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms