Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.01□□□□□ -0.65
IFNA1P01562 MESTP3-201ENST00000503460 968 ntBASIC11.01□□□□□ -0.65
IFNA1P01562 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC11.01□□□□□ -0.65
IFNA1P01562 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.01□□□□□ -0.65
IFNA1P01562 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC11.01□□□□□ -0.65
IFNA1P01562 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC11.01□□□□□ -0.65
IFNA1P01562 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.01□□□□□ -0.65
IFNA1P01562 RPL18-209ENST00000550645 463 ntTSL 5 BASIC11.01□□□□□ -0.65
IFNA1P01562 RPL18-214ENST00000552588 559 ntTSL 3 BASIC11.01□□□□□ -0.65
IFNA1P01562 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC11.01□□□□□ -0.65
IFNA1P01562 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.01□□□□□ -0.65
IFNA1P01562 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC11.01□□□□□ -0.65
IFNA1P01562 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC11.01□□□□□ -0.65
IFNA1P01562 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC11.01□□□□□ -0.65
IFNA1P01562 AC140113.2-201ENST00000604370 208 ntBASIC11.01□□□□□ -0.65
IFNA1P01562 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC11.01□□□□□ -0.65
IFNA1P01562 AL391069.4-201ENST00000609583 481 ntBASIC11.01□□□□□ -0.65
IFNA1P01562 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
IFNA1P01562 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
IFNA1P01562 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
IFNA1P01562 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
IFNA1P01562 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC11.01□□□□□ -0.65
IFNA1P01562 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
IFNA1P01562 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
IFNA1P01562 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC11.01□□□□□ -0.65
IFNA1P01562 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
IFNA1P01562 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
IFNA1P01562 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC11.01□□□□□ -0.65
IFNA1P01562 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC11.01□□□□□ -0.65
IFNA1P01562 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
IFNA1P01562 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
IFNA1P01562 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC11□□□□□ -0.65
IFNA1P01562 OTOG-201ENST00000342528 4992 ntTSL 2 BASIC11□□□□□ -0.65
IFNA1P01562 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 IKZF4-202ENST00000431367 5021 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC11□□□□□ -0.65
IFNA1P01562 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 LAP3P2-201ENST00000454686 1454 ntBASIC11□□□□□ -0.65
IFNA1P01562 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC11□□□□□ -0.65
IFNA1P01562 LAMA4-201ENST00000230538 6547 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 TMEM164-202ENST00000372068 5566 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 KCTD21-AS1-207ENST00000600795 1549 ntBASIC11□□□□□ -0.65
IFNA1P01562 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC11□□□□□ -0.65
IFNA1P01562 IQGAP3-201ENST00000361170 5988 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC11□□□□□ -0.65
IFNA1P01562 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
IFNA1P01562 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
IFNA1P01562 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC11□□□□□ -0.65
IFNA1P01562 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC11□□□□□ -0.65
IFNA1P01562 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC11□□□□□ -0.65
IFNA1P01562 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
IFNA1P01562 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC11□□□□□ -0.65
IFNA1P01562 SPDYE12P-201ENST00000618416 771 ntBASIC11□□□□□ -0.65
IFNA1P01562 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC11□□□□□ -0.65
IFNA1P01562 CELSR2-201ENST00000271332 10534 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC11□□□□□ -0.65
IFNA1P01562 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 GBP1P1-201ENST00000394662 1740 ntBASIC11□□□□□ -0.65
IFNA1P01562 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC11□□□□□ -0.65
IFNA1P01562 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 AGGF1-201ENST00000312916 4509 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
IFNA1P01562 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms