Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ZIC3O60481 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.45□□□□□ -0.42
ZIC3O60481 AC104581.4-201ENST00000623126 3052 ntBASIC12.45□□□□□ -0.42
ZIC3O60481 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ZIC3O60481 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ZIC3O60481 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
ZIC3O60481 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
ZIC3O60481 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ZIC3O60481 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ZIC3O60481 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC12.45□□□□□ -0.42
ZIC3O60481 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
ZIC3O60481 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.44□□□□□ -0.42
ZIC3O60481 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 AL359845.1-201ENST00000458202 1648 ntBASIC12.44□□□□□ -0.42
ZIC3O60481 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC12.44□□□□□ -0.42
ZIC3O60481 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
ZIC3O60481 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.44□□□□□ -0.42
ZIC3O60481 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.44□□□□□ -0.42
ZIC3O60481 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 ZNF493-208ENST00000599461 1769 ntBASIC12.44□□□□□ -0.42
ZIC3O60481 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
ZIC3O60481 AC021305.1-201ENST00000520656 1514 ntBASIC12.44□□□□□ -0.42
ZIC3O60481 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.44□□□□□ -0.42
ZIC3O60481 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
ZIC3O60481 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 AL391647.1-201ENST00000395664 511 ntBASIC12.44□□□□□ -0.42
ZIC3O60481 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 AL357563.1-201ENST00000404728 395 ntBASIC12.44□□□□□ -0.42
ZIC3O60481 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC12.44□□□□□ -0.42
ZIC3O60481 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.44□□□□□ -0.42
ZIC3O60481 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.44□□□□□ -0.42
ZIC3O60481 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC12.44□□□□□ -0.42
ZIC3O60481 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.44□□□□□ -0.42
ZIC3O60481 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC12.44□□□□□ -0.42
ZIC3O60481 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC12.44□□□□□ -0.42
ZIC3O60481 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.44□□□□□ -0.42
ZIC3O60481 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.44□□□□□ -0.42
ZIC3O60481 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC12.44□□□□□ -0.42
ZIC3O60481 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.44□□□□□ -0.42
ZIC3O60481 MIR8071-1-201ENST00000616769 65 ntBASIC12.44□□□□□ -0.42
ZIC3O60481 MIR8071-2-201ENST00000616772 65 ntBASIC12.44□□□□□ -0.42
ZIC3O60481 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.44□□□□□ -0.42
ZIC3O60481 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
ZIC3O60481 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.44□□□□□ -0.42
ZIC3O60481 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.44□□□□□ -0.42
ZIC3O60481 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZIC3O60481 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.43□□□□□ -0.42
ZIC3O60481 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.43□□□□□ -0.42
ZIC3O60481 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ZIC3O60481 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC12.43□□□□□ -0.42
ZIC3O60481 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.43□□□□□ -0.42
ZIC3O60481 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.43□□□□□ -0.42
ZIC3O60481 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.43□□□□□ -0.42
ZIC3O60481 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.43□□□□□ -0.42
ZIC3O60481 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
ZIC3O60481 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZIC3O60481 RPL17P11-201ENST00000417593 544 ntBASIC12.43□□□□□ -0.42
ZIC3O60481 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms