Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.12□□□□□ -0.31
IFT52Q9Y366 KRT223P-202ENST00000449164 1292 ntBASIC13.12□□□□□ -0.31
IFT52Q9Y366 RPSAP36-202ENST00000494591 1261 ntBASIC13.12□□□□□ -0.31
IFT52Q9Y366 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
IFT52Q9Y366 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.12□□□□□ -0.31
IFT52Q9Y366 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
IFT52Q9Y366 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.12□□□□□ -0.31
IFT52Q9Y366 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.12□□□□□ -0.31
IFT52Q9Y366 BNIP3P13-201ENST00000599968 566 ntBASIC13.12□□□□□ -0.31
IFT52Q9Y366 COX11-210ENST00000639671 696 ntBASIC13.12□□□□□ -0.31
IFT52Q9Y366 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFT52Q9Y366 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFT52Q9Y366 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IFT52Q9Y366 AL359845.1-201ENST00000458202 1648 ntBASIC13.12□□□□□ -0.31
IFT52Q9Y366 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.12□□□□□ -0.31
IFT52Q9Y366 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFT52Q9Y366 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.12□□□□□ -0.31
IFT52Q9Y366 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IFT52Q9Y366 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFT52Q9Y366 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
IFT52Q9Y366 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFT52Q9Y366 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFT52Q9Y366 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFT52Q9Y366 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.12□□□□□ -0.31
IFT52Q9Y366 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.12□□□□□ -0.31
IFT52Q9Y366 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFT52Q9Y366 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
IFT52Q9Y366 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.12□□□□□ -0.31
IFT52Q9Y366 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
IFT52Q9Y366 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.12□□□□□ -0.31
IFT52Q9Y366 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IFT52Q9Y366 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 AL031719.1-201ENST00000623365 2587 ntBASIC13.11□□□□□ -0.31
IFT52Q9Y366 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 MIR663B-201ENST00000408361 115 ntBASIC13.11□□□□□ -0.31
IFT52Q9Y366 AC005034.1-201ENST00000426657 489 ntBASIC13.11□□□□□ -0.31
IFT52Q9Y366 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.11□□□□□ -0.31
IFT52Q9Y366 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 AC022210.1-201ENST00000449856 793 ntBASIC13.11□□□□□ -0.31
IFT52Q9Y366 RNMTL1P1-201ENST00000454103 560 ntBASIC13.11□□□□□ -0.31
IFT52Q9Y366 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 RN7SL163P-201ENST00000583100 276 ntBASIC13.11□□□□□ -0.31
IFT52Q9Y366 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 LINC01815-202ENST00000641468 1409 ntBASIC13.11□□□□□ -0.31
IFT52Q9Y366 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IFT52Q9Y366 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
IFT52Q9Y366 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFT52Q9Y366 AC004899.1-201ENST00000424687 1714 ntBASIC13.1□□□□□ -0.31
IFT52Q9Y366 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
IFT52Q9Y366 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IFT52Q9Y366 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFT52Q9Y366 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFT52Q9Y366 STRCP1-201ENST00000509801 5328 ntBASIC13.1□□□□□ -0.31
IFT52Q9Y366 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.1□□□□□ -0.31
IFT52Q9Y366 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFT52Q9Y366 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.1□□□□□ -0.31
IFT52Q9Y366 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFT52Q9Y366 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.1□□□□□ -0.31
IFT52Q9Y366 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
IFT52Q9Y366 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms