Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
DUX4Q9UBX2 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
DUX4Q9UBX2 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
DUX4Q9UBX2 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
DUX4Q9UBX2 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
DUX4Q9UBX2 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
DUX4Q9UBX2 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
DUX4Q9UBX2 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
DUX4Q9UBX2 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.38□□□□□ -0.43
DUX4Q9UBX2 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
DUX4Q9UBX2 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
DUX4Q9UBX2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
DUX4Q9UBX2 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
DUX4Q9UBX2 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
DUX4Q9UBX2 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.38□□□□□ -0.43
DUX4Q9UBX2 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 CHMP1AP1-201ENST00000445563 662 ntBASIC12.37□□□□□ -0.43
DUX4Q9UBX2 RPL13AP20-201ENST00000459725 609 ntBASIC12.37□□□□□ -0.43
DUX4Q9UBX2 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 AC010328.2-201ENST00000597698 1111 ntBASIC12.37□□□□□ -0.43
DUX4Q9UBX2 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 AL033527.4-201ENST00000641026 673 ntBASIC12.37□□□□□ -0.43
DUX4Q9UBX2 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.37□□□□□ -0.43
DUX4Q9UBX2 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 BX537318.2-201ENST00000624893 4162 ntBASIC12.37□□□□□ -0.43
DUX4Q9UBX2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
DUX4Q9UBX2 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 KHSRPP1-201ENST00000427983 1768 ntBASIC12.36□□□□□ -0.43
DUX4Q9UBX2 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 CAMK4-201ENST00000282356 12240 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
DUX4Q9UBX2 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 206.6 ms