Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 AC089987.1-201ENST00000551654 2209 ntBASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 AC027612.1-201ENST00000445234 2395 ntBASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 CICP8-201ENST00000455800 2813 ntBASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 SNU13-204ENST00000402458 462 ntTSL 3 BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 HNRNPA1P21-201ENST00000424115 961 ntBASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 RPSAP12-201ENST00000435879 888 ntBASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 KRT8P24-201ENST00000560290 1559 ntBASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 FMO6P-201ENST00000236166 1620 ntBASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 AL356585.2-201ENST00000625078 2396 ntBASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 AC103563.1-201ENST00000429316 123 ntBASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DNMT3BQ9UBC3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DNMT3BQ9UBC3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms