Protein–RNA interactions for Protein: Q9NP50

FAM60A, Protein FAM60A, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60AQ9NP50 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FAM60AQ9NP50 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.15□□□□□ -0.3
FAM60AQ9NP50 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FAM60AQ9NP50 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
FAM60AQ9NP50 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
FAM60AQ9NP50 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
FAM60AQ9NP50 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.15□□□□□ -0.3
FAM60AQ9NP50 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.15□□□□□ -0.3
FAM60AQ9NP50 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
FAM60AQ9NP50 AC130686.1-201ENST00000622936 2466 ntBASIC13.15□□□□□ -0.3
FAM60AQ9NP50 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
FAM60AQ9NP50 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FAM60AQ9NP50 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.15□□□□□ -0.31
FAM60AQ9NP50 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
FAM60AQ9NP50 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
FAM60AQ9NP50 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 GRK6P1-201ENST00000400595 1711 ntBASIC13.14□□□□□ -0.31
FAM60AQ9NP50 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 ABCD1P4-201ENST00000399687 604 ntBASIC13.14□□□□□ -0.31
FAM60AQ9NP50 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 GULOP-201ENST00000454030 748 ntBASIC13.14□□□□□ -0.31
FAM60AQ9NP50 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 AC026410.1-201ENST00000507366 1101 ntBASIC13.14□□□□□ -0.31
FAM60AQ9NP50 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 DLK1-205ENST00000556051 469 ntTSL 2 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 AC011471.3-201ENST00000623576 402 ntBASIC13.14□□□□□ -0.31
FAM60AQ9NP50 AL451007.2-201ENST00000632004 563 ntBASIC13.14□□□□□ -0.31
FAM60AQ9NP50 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.14□□□□□ -0.31
FAM60AQ9NP50 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FAM60AQ9NP50 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 PXK-210ENST00000479241 2817 ntTSL 2 BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.13□□□□□ -0.31
FAM60AQ9NP50 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 NCLP1-201ENST00000445357 1963 ntBASIC13.13□□□□□ -0.31
FAM60AQ9NP50 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
FAM60AQ9NP50 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms