Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RPL29P2-201ENST00000488409 460 ntBASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 AC109830.1-203ENST00000506638 467 ntTSL 2 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 RPL10P8-201ENST00000522888 313 ntBASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 PCTP-206ENST00000573500 919 ntTSL 3 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 RN7SL556P-201ENST00000582856 298 ntBASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 MIR7848-201ENST00000617402 101 ntBASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 SALL4P5-201ENST00000419001 1760 ntBASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 AGAP7P-201ENST00000582299 2062 ntBASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 AGAP14-201ENST00000624701 2060 ntBASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNTNAP3Q9BZ76 OR7E12P-201ENST00000344740 973 ntBASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 RNF7-202ENST00000393000 805 ntTSL 2 BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 MKL1-204ENST00000402630 747 ntTSL 2 BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 DNM1P46-202ENST00000415963 882 ntBASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 AC005722.1-201ENST00000431878 964 ntBASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 AC092865.2-201ENST00000439409 971 ntBASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 AC093700.1-201ENST00000503348 717 ntBASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 GCOM2-201ENST00000509133 1104 ntBASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 AC113385.2-201ENST00000614465 762 ntBASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 BX510359.7-201ENST00000619819 630 ntBASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 AC099552.4-201ENST00000624248 949 ntBASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 PTENP1-202ENST00000532280 3996 ntBASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 C18orf15-201ENST00000623680 2534 ntBASIC13.27□□□□□ -0.29
CNTNAP3Q9BZ76 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CNTNAP3Q9BZ76 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNTNAP3Q9BZ76 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CNTNAP3Q9BZ76 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.26□□□□□ -0.29
CNTNAP3Q9BZ76 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNTNAP3Q9BZ76 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNTNAP3Q9BZ76 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNTNAP3Q9BZ76 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNTNAP3Q9BZ76 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CNTNAP3Q9BZ76 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNTNAP3Q9BZ76 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNTNAP3Q9BZ76 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CNTNAP3Q9BZ76 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CNTNAP3Q9BZ76 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNTNAP3Q9BZ76 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNTNAP3Q9BZ76 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms